RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CA6P23280 308 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 PTGFRP43088 359 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 H2BFSP57053 126 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 UBE2V2Q15819 145 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 C2orf68Q2NKX9 166 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 ACTBL2Q562R1 376 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 SPRNQ5BIV9 151 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 PLAC9Q5JTB6 97 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 C12orf45Q8N5I9 185 aaPredicted RBP16.36■□□□□ 0.21
CCM2-216ENST00000488727 GVQW1Q8N7I0 195 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 SEMA6DQ8NFY4 1073 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 TMEM100Q9NV29 134 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 ZDHHC8Q9ULC8 765 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 PIGLQ9Y2B2 252 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 KCNK7Q9Y2U2 307 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 HMSDA8MTL9 139 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 GOSR2O14653 212 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 SOCS1O15524 211 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 CBX5P45973 191 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 CCL8P80075 99 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 CSNK2A3Q8NEV1 391 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 OR2Z1Q8NG97 314 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 OR13G1Q8NGZ3 307 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 ELMOD3Q96FG2 381 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 TM2D1Q9BX74 207 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 RAB1BQ9H0U4 201 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 VSIG4Q9Y279 399 aa16.36■□□□□ 0.21
CCM2-216ENST00000488727 CRTAPO75718 401 aaPredicted RBP16.35■□□□□ 0.21
CCM2-216ENST00000488727 SLC22A5O76082 557 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 MPC2O95563 127 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 ATP5J2P56134 94 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 TMEM50BP56557 158 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 SCGB2B2Q4G0G5 96 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 C6orf183Q5T699 404 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 FAHD2BQ6P2I3 314 aaPredicted RBP16.35■□□□□ 0.21
CCM2-216ENST00000488727 SLC25A42Q86VD7 318 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 MRGPRFQ96AM1 343 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 FAHD2AQ96GK7 314 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 PAPOLGQ9BWT3 736 aaKnown RBP16.35■□□□□ 0.21
CCM2-216ENST00000488727 BANF2Q9H503 90 aa16.35■□□□□ 0.21
CCM2-216ENST00000488727 CCDC168Q8NDH2 2452 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 ANKRD30BLA7E2S9 258 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 IFNA7P01567 189 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 HRH1P35367 487 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 SRSF4Q08170 494 aaKnown RBP16.34■□□□□ 0.21
CCM2-216ENST00000488727 VAX1Q5SQQ9 334 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 CLVS2Q5SYC1 327 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 OR52W1Q6IF63 320 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 LPCAT3Q6P1A2 487 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 TMED4Q7Z7H5 227 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 SPSB1Q96BD6 273 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 OCSTAMPQ9BR26 566 aa16.34■□□□□ 0.21
CCM2-216ENST00000488727 ADAT1Q9BUB4 502 aaKnown RBP16.34■□□□□ 0.21
CCM2-216ENST00000488727 ZNF816-ZNF321PA0A0X1KG74 233 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 A0A1W2PP11 408 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 CA11O75493 328 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 CST4P01036 141 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 CD55P08174 381 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 CXCL2P19875 107 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 EFNA4P52798 201 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 DHRS2Q13268 280 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 OPCMLQ14982 345 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 ARL6IP1Q15041 203 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 GRK1Q15835 563 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 FAM209AQ5JX71 171 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 RTN4RL2Q86UN3 420 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 LRRC75A-AS1Q8N1F1 130 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 WDR89Q96FK6 387 aaPredicted RBP16.33■□□□□ 0.21
CCM2-216ENST00000488727 DIRC2Q96SL1 478 aa16.33■□□□□ 0.21
CCM2-216ENST00000488727 DPCDQ9BVM2 203 aaPredicted RBP16.33■□□□□ 0.21
CCM2-216ENST00000488727 ZNF850A8MQ14 1090 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 MCRIP1C9JLW8 97 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 L7N2F9 121 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 SIX6O95475 246 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 F12P00748 615 aaPredicted RBP16.33■□□□□ 0.2
CCM2-216ENST00000488727 NFYAP23511 347 aaPredicted RBP16.33■□□□□ 0.2
CCM2-216ENST00000488727 ZBTB25P24278 435 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 UBE2MP61081 183 aaKnown RBP16.33■□□□□ 0.2
CCM2-216ENST00000488727 TNFAIP6P98066 277 aaPredicted RBP16.33■□□□□ 0.2
CCM2-216ENST00000488727 DMRTC1Q5HYR2 192 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 DCAF12L2Q5VW00 463 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 NEU4Q8WWR8 484 aaPredicted RBP16.33■□□□□ 0.2
CCM2-216ENST00000488727 PIGCQ92535 297 aa16.33■□□□□ 0.2
CCM2-216ENST00000488727 CPNE2Q96FN4 548 aaPredicted RBP16.33■□□□□ 0.2
CCM2-216ENST00000488727 TANC2Q9HCD6 1990 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 LINC00862A6NCI5 91 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 CSN2P05814 226 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 MGMTP16455 207 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 HLA-GP17693 338 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 SEC61A1P61619 476 aaKnown RBP16.32■□□□□ 0.2
CCM2-216ENST00000488727 PRDX4Q13162 271 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 OR8G1Q15617 311 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 LY6G6FQ5SQ64 297 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 TMEM42Q69YG0 159 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 C1QL2Q7Z5L3 287 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 LYG2Q86SG7 212 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 ARRDC1Q8N5I2 433 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 OR4K15Q8NH41 348 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 ARHGAP5-AS1Q96IT6 56 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms