RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 GTF2F2P13984 249 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 P2RX3P56373 397 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 RPS25P62851 125 aaKnown RBP12.35□□□□□ -0.43
CXCL12-207ENST00000488591 BAMBIQ13145 260 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 GLT8D1Q68CQ7 371 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 AWAT2Q6E213 333 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 GLIPR1L1Q6UWM5 242 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 TRAPPC6BQ86SZ2 158 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 LINC00596Q86U02 117 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 FCGR1BQ92637 280 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 MDFIQ99750 246 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 SF3B6Q9Y3B4 125 aaKnown RBP12.35□□□□□ -0.43
CXCL12-207ENST00000488591 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
CXCL12-207ENST00000488591 RNASEK-C17orf49H0YIS7 233 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 SC5DO75845 299 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 CSN2P05814 226 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 CCL3L1P16619 93 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 GABRA5P31644 462 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 UBE2E1P51965 193 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 ERVFRD-1P60508 538 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 ZNF273Q14593 569 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 TUSC1Q2TAM9 212 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 DEFB112Q30KQ8 113 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 PIGYQ3MUY2 71 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 PAN3Q58A45 887 aaKnown RBP12.34□□□□□ -0.43
CXCL12-207ENST00000488591 NHLRC3Q5JS37 347 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 FAM27D1Q5T7N8 215 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 SPARTQ8N0X7 666 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 TNFRSF14Q92956 283 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 MRPS24Q96EL2 167 aaKnown RBP12.34□□□□□ -0.43
CXCL12-207ENST00000488591 ZNF714Q96N38 554 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 PPA2Q9H2U2 334 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
CXCL12-207ENST00000488591 SOX21Q9Y651 276 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-207ENST00000488591 LINC00312Q9Y6C7 94 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 CUBNO60494 3623 aa12.34□□□□□ -0.43
CXCL12-207ENST00000488591 TRGV10A0A0A0MS01 117 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 NPFFO15130 113 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 RBP4P02753 201 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 GP2P55259 537 aaKnown RBP12.33□□□□□ -0.44
CXCL12-207ENST00000488591 RBM11P57052 281 aaKnown RBP12.33□□□□□ -0.44
CXCL12-207ENST00000488591 AESQ08117 197 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 MPV17LQ2QL34 196 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 KRBOX4Q5JUW0 171 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 ZNF773Q6PK81 442 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 TMEM91Q6ZNR0 172 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 LRRTM1Q86UE6 522 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 TPRX1Q8N7U7 411 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 ZNF48Q96MX3 618 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-207ENST00000488591 BARHL1Q9BZE3 327 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
CXCL12-207ENST00000488591 UBE2J1Q9Y385 318 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-207ENST00000488591 A0A1W2PRD5 423 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 A0A1W2PRF3 423 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 A0A1W2PRM7 423 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 CCRL2O00421 344 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 HSPB6O14558 160 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 OR7C1O76099 320 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-207ENST00000488591 UBBP0CG47 229 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 RANBP1P43487 201 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 KCNJ3P48549 501 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 DLX1P56177 255 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 FABP5Q01469 135 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 PRB3Q04118 309 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-207ENST00000488591 KLRD1Q13241 179 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-207ENST00000488591 KCTD21Q4G0X4 260 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 UBE2UQ5VVX9 321 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 Q6YL49 198 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 C11orf42Q8N5U0 333 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 ZDHHC22Q8N966 263 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 OR4D6Q8NGJ1 314 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 FAM216AQ8WUB2 273 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 SLC25A28Q96A46 364 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 C19orf24Q9BVV8 132 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 CST11Q9H112 138 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 PPIL3Q9H2H8 161 aaKnown RBP12.32□□□□□ -0.44
CXCL12-207ENST00000488591 GAL3ST2Q9H3Q3 398 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 NDUFB11Q9NX14 153 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 ING3Q9NXR8 418 aa12.32□□□□□ -0.44
CXCL12-207ENST00000488591 FBN1P35555 2871 aaKnown RBP12.32□□□□□ -0.44
CXCL12-207ENST00000488591 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 A0A0U1RQK1 487 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 MDFIC2A0A1B0GVS7 189 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 ODAMA1E959 279 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
CXCL12-207ENST00000488591 MEIOCA2RUB1 952 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 DNAJC9-AS1A6NH13 148 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 H3BUI4 141 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
CXCL12-207ENST00000488591 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-207ENST00000488591 PAHP00439 452 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 FBP1P09467 338 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 IGHV1-8P0DP01 117 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms