RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 C1orf140Q5VVS0 124 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 TOMM20LQ6UXN7 152 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 TCF24Q7RTU0 167 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 DPY19L4Q7Z388 723 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C20orf196Q8IYI0 205 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 STPG4Q8N801 248 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF321PQ8N8H1 164 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CDRT4Q8N9R6 151 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CHST4Q8NCG5 386 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF738Q8NE65 137 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 Q8NFD4 153 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR2G3Q8NGZ4 309 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MRPL24Q96A35 216 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SDSLQ96GA7 329 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ABHD14BQ96IU4 210 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 LMLNQ96KR4 655 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 VAMP8Q9BV40 100 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MAP1LC3BQ9GZQ8 125 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C6orf106Q9H6K1 298 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZDHHC6Q9H6R6 413 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ELOVL3Q9HB03 270 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 LANCL2Q9NS86 450 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 NAT8Q9UHE5 227 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 HHLA2Q9UM44 414 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C19orf53Q9UNZ5 99 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C14orf166Q9Y224 244 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ST3GAL6Q9Y274 331 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SCN10AQ9Y5Y9 1956 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PCNTO95613 3336 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 NUMA1Q14980 2115 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 A0A0A6YYD4 124 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 IGKV1-8A0A0C4DH67 115 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 A0A1B0GV50 99 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 LOC107986453A0A1B0GWG9 222 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MYADML2A6NDP7 307 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR6C6A6NF89 314 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF705FA8MVS1 300 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 F2RL2O00254 374 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ERI3O43414 337 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 AHSA1O95433 338 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CD55P08174 381 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CTXN2P0C2S0 81 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF705DP0CH99 300 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF705BP0CI00 300 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MYF5P13349 255 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 BMP5P22003 454 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 GLRA1P23415 457 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 DNASE1L1P49184 302 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 COMPP49747 757 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 FLT3LGP49771 235 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF41P51814 821 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RAB11AP62491 216 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PLP2Q04941 152 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MEP1BQ16820 701 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ITPRIPL2Q3MIP1 535 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OCIAD2Q56VL3 154 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 WDR25Q64LD2 544 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PRSS57Q6UWY2 283 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 Q6ZWC4 215 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C16orf82Q7Z2V1 217 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 NUP54Q7Z3B4 507 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 FAM90A1Q86YD7 464 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF547Q8IVP9 402 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SLC22A24Q8N4F4 322 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C12orf76Q8N812 135 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 LINC01356Q8N9X3 169 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR5AR1Q8NGP9 310 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 GPR146Q96CH1 333 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RPUSD4Q96CM3 377 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 FAM71F1Q96KD3 344 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C1orf147Q96MC9 270 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CIB3Q96Q77 187 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR5B12Q96R08 314 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RASL10BQ96S79 203 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 ABHD14AQ9BUJ0 271 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SF3B5Q9BWJ5 86 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C1orf43Q9BWL3 253 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 LPAR5Q9H1C0 372 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CALHM2Q9HA72 323 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 TMEM9BQ9NQ34 198 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MRPL27Q9P0M9 148 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 UQCR10Q9UDW1 63 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PADI3Q9ULW8 664 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RPH3ALQ9UNE2 315 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 GPR34Q9UPC5 381 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SLC7A11Q9UPY5 501 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SLC22A13Q9Y226 551 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RCL1Q9Y2P8 373 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 WIPI2Q9Y4P8 454 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 OBSL1O75147 1896 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 IGKV1D-42A0A075B6H8 117 aa4.1□□□□□ -1.75
CDC42BPA-213ENST00000488131 NPIPA5A0A0B4J1W7 369 aa4.1□□□□□ -1.75
CDC42BPA-213ENST00000488131 MED19A0JLT2 244 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-213ENST00000488131 C9orf118A6NHY6 69 aa4.1□□□□□ -1.75
CDC42BPA-213ENST00000488131 PRSS29PA6NIE9 313 aa4.1□□□□□ -1.75
CDC42BPA-213ENST00000488131 C4orf47A7E2U8 309 aa4.1□□□□□ -1.75
CDC42BPA-213ENST00000488131 FOXI3A8MTJ6 420 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms