RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NPBWR1P48145 328 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 FXYD4P59646 89 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 Q6ZPA2 131 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 SLC25A26Q70HW3 274 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 LYZL2Q7Z4W2 148 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 IL22RA1Q8N6P7 574 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 ZFP62Q8NB50 900 aaPredicted RBP22.45■■□□□ 1.18
HLA-C-208ENST00000487245 GINS3Q9BRX5 216 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 ADAT1Q9BUB4 502 aaKnown RBP22.45■■□□□ 1.18
HLA-C-208ENST00000487245 PAPOLGQ9BWT3 736 aaKnown RBP22.45■■□□□ 1.18
HLA-C-208ENST00000487245 PVALBP20472 110 aaPredicted RBP22.44■■□□□ 1.18
HLA-C-208ENST00000487245 CCNOP22674 350 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 DVL1P1P54792 670 aaPredicted RBP22.44■■□□□ 1.18
HLA-C-208ENST00000487245 HERV-K104P61576 105 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 SRPXP78539 464 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 PRDX4Q13162 271 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 TMEM88Q6PEY1 159 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 Q6ZRG5 221 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 ERGIC1Q969X5 290 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 FAM212BQ9NTI7 297 aaPredicted RBP22.44■■□□□ 1.18
HLA-C-208ENST00000487245 R4GN57 208 aa22.44■■□□□ 1.18
HLA-C-208ENST00000487245 BORCS7-ASMTA0A0B4J1R7 106 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 FAM157AC9JC47 383 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 SCGB1D2O95969 90 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 UCP2P55851 309 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 CEACAM21Q3KPI0 293 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 PHLDA2Q53GA4 152 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 CALHM1Q8IU99 346 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 ZDHHC23Q8IYP9 409 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 FAM86C1Q9NVL1 165 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 SS18L1O75177 396 aaPredicted RBP22.43■■□□□ 1.18
HLA-C-208ENST00000487245 AADACP22760 399 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 RAB1AP62820 205 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 BRICD5Q6PL45 260 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 CBLN2Q8IUK8 224 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 WNT2BQ93097 391 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 ZNF442Q9H7R0 627 aa22.43■■□□□ 1.18
HLA-C-208ENST00000487245 FAM221AA4D161 298 aa22.42■■□□□ 1.18
HLA-C-208ENST00000487245 SFTA3P0C7M3 94 aa22.42■■□□□ 1.18
HLA-C-208ENST00000487245 SWI5Q1ZZU3 235 aa22.42■■□□□ 1.18
HLA-C-208ENST00000487245 NAXEQ8NCW5 288 aa22.42■■□□□ 1.18
HLA-C-208ENST00000487245 POM121L2Q96KW2 1035 aa22.42■■□□□ 1.18
HLA-C-208ENST00000487245 ST8SIA3O43173 380 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 FOXG1P55316 489 aaPredicted RBP22.41■■□□□ 1.18
HLA-C-208ENST00000487245 RND3P61587 244 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 OR5L1Q8NGL2 311 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 OR4D5Q8NGN0 318 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 SMIM3Q9BZL3 60 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 GP6Q9HCN6 339 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 PPYP01298 95 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 DANCRP0C864 163 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 HMGN3Q15651 99 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 NUFIP2Q7Z417 695 aaKnown RBP22.41■■□□□ 1.18
HLA-C-208ENST00000487245 MKXQ8IYA7 352 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 HIST1H2AAQ96QV6 131 aa22.41■■□□□ 1.18
HLA-C-208ENST00000487245 OR7C1O76099 320 aaPredicted RBP22.4■■□□□ 1.18
HLA-C-208ENST00000487245 ZNF205O95201 554 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 CDS2O95674 445 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 SPP1P10451 314 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 FBXW12Q6X9E4 464 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 OR5A2Q8NGI9 324 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 KIRREL1Q96J84 757 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 WFDC1Q9HC57 220 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 ZDHHC8Q9ULC8 765 aa22.4■■□□□ 1.18
HLA-C-208ENST00000487245 TNRC6AQ8NDV7 1962 aaKnown RBP22.4■■□□□ 1.18
HLA-C-208ENST00000487245 F12P00748 615 aaPredicted RBP22.39■■□□□ 1.18
HLA-C-208ENST00000487245 CD82P27701 267 aa22.39■■□□□ 1.18
HLA-C-208ENST00000487245 RAB5CP51148 216 aa22.39■■□□□ 1.18
HLA-C-208ENST00000487245 FGF12P61328 243 aa22.39■■□□□ 1.18
HLA-C-208ENST00000487245 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.39■■□□□ 1.18
HLA-C-208ENST00000487245 KDF1Q8NAX2 398 aaPredicted RBP22.39■■□□□ 1.18
HLA-C-208ENST00000487245 OR11L1Q8NGX0 322 aa22.39■■□□□ 1.18
HLA-C-208ENST00000487245 EXTL1Q92935 676 aa22.39■■□□□ 1.18
HLA-C-208ENST00000487245 BSCL2Q96G97 398 aaPredicted RBP22.39■■□□□ 1.18
HLA-C-208ENST00000487245 C11orf1Q9H5F2 150 aa22.39■■□□□ 1.18
HLA-C-208ENST00000487245 MPPED1O15442 326 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 PHF1O43189 567 aaPredicted RBP22.39■■□□□ 1.17
HLA-C-208ENST00000487245 APLNRP35414 380 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 NPBWR2P48146 333 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 KCNJ3P48549 501 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 SOX8P57073 446 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 FAM76BQ5HYJ3 339 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 DMBX1Q8NFW5 382 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 NANOS1Q8WY41 292 aaKnown RBP22.39■■□□□ 1.17
HLA-C-208ENST00000487245 MLXQ9UH92 298 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 STRAPQ9Y3F4 350 aaKnown RBP22.39■■□□□ 1.17
HLA-C-208ENST00000487245 KPTNQ9Y664 436 aa22.39■■□□□ 1.17
HLA-C-208ENST00000487245 DIRAS3O95661 229 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 NAPSAO96009 420 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 PAX6P26367 422 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 CD80P33681 288 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 MPV17LQ2QL34 196 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 TMEM178AQ8NBL3 297 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 OR52M1Q8NGK5 317 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 ABHD14BQ96IU4 210 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 TMEM56Q96MV1 263 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 TMEM56-RWDD3S4R434 201 aa22.38■■□□□ 1.17
HLA-C-208ENST00000487245 TRGV5A0A0B4J1U4 118 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 C3orf85A0A1B0GTC6 90 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 ZNF503-AS2A6NEH8 195 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms