RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 HEATR1Q9H583 2144 aaKnown RBP12.39□□□□□ -0.43
CHD3-211ENST00000481999 ROS1P08922 2347 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 TMEM218A2RU14 115 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 SS18L1O75177 396 aaPredicted RBP12.39□□□□□ -0.43
CHD3-211ENST00000481999 ATG12O94817 140 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 SERPINA5P05154 406 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 SELEP16581 610 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 HAAOP46952 286 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 PDZK1IP1Q13113 114 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 IL15RAQ13261 267 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 OR2T2Q6IF00 324 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 ALKBH2Q6NS38 261 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 BOLLQ8N9W6 283 aaKnown RBP12.39□□□□□ -0.43
CHD3-211ENST00000481999 TMED6Q8WW62 240 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 ZNF488Q96MN9 340 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 SIGLEC5O15389 551 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 KNG1P01042 644 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 IFNA2P01563 188 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 DUSP1P28562 367 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
CHD3-211ENST00000481999 PLP2Q04941 152 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 RAB32Q13637 225 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 ALKBH6Q3KRA9 238 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 SEM1Q6ZVN7 128 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 ZADH2Q8N4Q0 377 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 APOBEC3DQ96AK3 386 aaPredicted RBP12.39□□□□□ -0.43
CHD3-211ENST00000481999 SULT4A1Q9BR01 284 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 RGCCQ9H4X1 137 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 C1orf123Q9NWV4 160 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 EDARQ9UNE0 448 aa12.39□□□□□ -0.43
CHD3-211ENST00000481999 HSPB6O14558 160 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 EIF5AP63241 154 aaKnown RBP12.38□□□□□ -0.43
CHD3-211ENST00000481999 Q6ZPA2 131 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 FAM219AQ8IW50 185 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 RBMXL3Q8N7X1 1067 aaKnown RBP12.38□□□□□ -0.43
CHD3-211ENST00000481999 OR10AD1Q8NGE0 317 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 TSNAXQ99598 290 aaKnown RBP12.38□□□□□ -0.43
CHD3-211ENST00000481999 AIFM2Q9BRQ8 373 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 OPN3Q9H1Y3 402 aaPredicted RBP12.38□□□□□ -0.43
CHD3-211ENST00000481999 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 ZNF175Q9Y473 711 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 AQP7O14520 342 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 HOXB5P09067 269 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 PTGER4P35408 488 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 APLNRP35414 380 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 ARR3P36575 388 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 ACSF3Q4G176 576 aaPredicted RBP12.38□□□□□ -0.43
CHD3-211ENST00000481999 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 SVBPQ8N300 66 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
CHD3-211ENST00000481999 SLC5A7Q9GZV3 580 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 GSKIPQ9P0R6 139 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 SLC7A11Q9UPY5 501 aa12.38□□□□□ -0.43
CHD3-211ENST00000481999 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 TAAR5O14804 337 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
CHD3-211ENST00000481999 ARHGDIBP52566 201 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 S100A10P60903 97 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
CHD3-211ENST00000481999 AK3Q9UIJ7 227 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 MED19A0JLT2 244 aaPredicted RBP12.37□□□□□ -0.43
CHD3-211ENST00000481999 CD300LBA8K4G0 201 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 SYNGR1O43759 233 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 FAM157CP0CG43 387 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 ZNF14P17017 642 aaPredicted RBP12.37□□□□□ -0.43
CHD3-211ENST00000481999 BCL3P20749 454 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 CA6P23280 308 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 FUT6P51993 359 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 GUSBP1Q15486 140 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 EIF5AL1Q6IS14 154 aaKnown RBP12.37□□□□□ -0.43
CHD3-211ENST00000481999 RPUSD3Q6P087 351 aaKnown RBP12.37□□□□□ -0.43
CHD3-211ENST00000481999 OR5T2Q8NGG2 359 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 MMP26Q9NRE1 261 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 LPAR3Q9UBY5 353 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 ANXA10Q9UJ72 324 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 HSF4Q9ULV5 492 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 LHX6Q9UPM6 363 aa12.37□□□□□ -0.43
CHD3-211ENST00000481999 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 ZNF732B4DXR9 585 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 TSPAN9O75954 239 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 MALLQ13021 153 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 RBM39Q14498 530 aaKnown RBP12.36□□□□□ -0.43
CHD3-211ENST00000481999 FAM74A3Q4VXF1 159 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 DECR2Q9NUI1 292 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 ZNF391Q9UJN7 358 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 FZR1Q9UM11 496 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 ABCD4O14678 606 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 OR7C1O76099 320 aaPredicted RBP12.36□□□□□ -0.43
CHD3-211ENST00000481999 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
CHD3-211ENST00000481999 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
CHD3-211ENST00000481999 C17orf78Q8N4C9 275 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms