RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 LY6EQ16553 131 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 ARSJQ5FYB0 599 aaPredicted RBP9.27□□□□□ -0.93
CCM2-213ENST00000480658 KRBOX4Q5JUW0 171 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 ZNF691Q5VV52 312 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 CRIP3Q6Q6R5 217 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 BATF2Q8N1L9 274 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 Q8N2B8 174 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 OR10A7Q8NGE5 316 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 OR51A4Q8NGJ6 313 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 OR52I1Q8NGK6 324 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 TMEM106AQ96A25 262 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
CCM2-213ENST00000480658 SMIM19Q96E16 107 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 MEGF8Q7Z7M0 2845 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 A0A087X0M5 115 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 A0A1B0GX30 115 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 CSTBP04080 98 aaKnown RBP9.26□□□□□ -0.93
CCM2-213ENST00000480658 CD34P28906 385 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 EMX1Q04741 257 aaPredicted RBP9.26□□□□□ -0.93
CCM2-213ENST00000480658 CDK5R1Q15078 307 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 SLC16A12Q6ZSM3 486 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 OR4S1Q8NGB4 309 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 OR51T1Q8NGJ9 327 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 OR5D18Q8NGL1 313 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 FAM192AQ9GZU8 254 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 IFT22Q9H7X7 185 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 LIN7BQ9HAP6 207 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 SPACA1Q9HBV2 294 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 TMEM138Q9NPI0 162 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 IL36GQ9NZH8 169 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 DPM3Q9P2X0 92 aa9.26□□□□□ -0.93
CCM2-213ENST00000480658 DIMT1Q9UNQ2 313 aaKnown RBP9.26□□□□□ -0.93
CCM2-213ENST00000480658 A0A0G2JK05 382 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 A6NDX4 124 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 H0YJX3 145 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 SLC33A1O00400 549 aaPredicted RBP9.25□□□□□ -0.93
CCM2-213ENST00000480658 CDK2P24941 298 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 MAPK3P27361 379 aaPredicted RBP9.25□□□□□ -0.93
CCM2-213ENST00000480658 ZP1P60852 638 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 TMEM30BQ3MIR4 351 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 NHLRC3Q5JS37 347 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 ZNF529Q6P280 563 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 TCF23Q7RTU1 214 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 LHFPL4Q7Z7J7 247 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 ABHD12Q8N2K0 398 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 KLHDC1Q8N7A1 406 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 OR4F17Q8NGA8 305 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 OR52N4Q8NGI2 321 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 OR51A2Q8NGJ7 313 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 OR52N1Q8NH53 320 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 TNFAIP8L1Q8WVP5 186 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 CFHR4Q92496 578 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 TAF15Q92804 592 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCM2-213ENST00000480658 RFT1Q96AA3 541 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 MRPS24Q96EL2 167 aaKnown RBP9.25□□□□□ -0.93
CCM2-213ENST00000480658 OR4F4Q96R69 305 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 NKX3-1Q99801 234 aaPredicted RBP9.25□□□□□ -0.93
CCM2-213ENST00000480658 SLC29A1Q99808 456 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 PDCD1LG2Q9BQ51 273 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 METTL9Q9H1A3 318 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 ISG20L2Q9H9L3 353 aaKnown RBP9.25□□□□□ -0.93
CCM2-213ENST00000480658 AMBNQ9NP70 447 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 BABAM2Q9NXR7 383 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 ZNF281Q9Y2X9 895 aa9.25□□□□□ -0.93
CCM2-213ENST00000480658 KBTBD11-OT1A0A1B0GTJ5 212 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 EFCAB10A6NFE3 127 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 XPNPEP2O43895 674 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 FBXO24O75426 580 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 LPLP06858 475 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 FAM106CPP0CH98 169 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 LIMS3P0CW19 117 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 LIMS4P0CW20 117 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 DUSP1P28562 367 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 ZNF93P35789 620 aaPredicted RBP9.24□□□□□ -0.93
CCM2-213ENST00000480658 SNU13P55769 128 aaKnown RBP9.24□□□□□ -0.93
CCM2-213ENST00000480658 SCN1BQ07699 218 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 AESQ08117 197 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 RIPK1Q13546 671 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 MPV17LQ2QL34 196 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 Q499Y3 187 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 PAN3Q58A45 887 aaKnown RBP9.24□□□□□ -0.93
CCM2-213ENST00000480658 NDUFA11Q86Y39 141 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 CDH26Q8IXH8 852 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 DHRSXQ8N5I4 330 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 Q8NFD4 153 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 OR4P4Q8NGL7 312 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 OR10AC1Q8NH08 325 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 OR9G1Q8NH87 305 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 PIFOQ8TCI5 191 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 C17orf50Q8WW18 174 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 APH1BQ8WW43 257 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 CYGBQ8WWM9 190 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 TMEM80Q96HE8 168 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 ZNF649Q9BS31 505 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 CNOT2Q9NZN8 540 aaKnown RBP9.24□□□□□ -0.93
CCM2-213ENST00000480658 IL36RNQ9UBH0 155 aa9.24□□□□□ -0.93
CCM2-213ENST00000480658 IGKV1-12A0A0C4DH73 117 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 FAM90A22PA8MWA6 464 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 MYL12BO14950 172 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms