RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TRIM63Q969Q1 353 aa14.71□□□□□ -0.05
UPF3A-206ENST00000480362 MARVELD3Q96A59 401 aa14.71□□□□□ -0.05
UPF3A-206ENST00000480362 CMSS1Q9BQ75 279 aaKnown RBP14.71□□□□□ -0.05
UPF3A-206ENST00000480362 HDHD3Q9BSH5 251 aaPredicted RBP14.71□□□□□ -0.05
UPF3A-206ENST00000480362 LIME1Q9H400 295 aa14.71□□□□□ -0.05
UPF3A-206ENST00000480362 MTFP1Q9UDX5 166 aa14.71□□□□□ -0.05
UPF3A-206ENST00000480362 ZNF222Q9UK12 451 aa14.71□□□□□ -0.05
UPF3A-206ENST00000480362 TMEM82A0PJX8 343 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 PSPNO60542 156 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 FCER2P06734 321 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 AMY2BP19961 511 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 GDNFP39905 211 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 MRPS15P82914 257 aaKnown RBP14.7□□□□□ -0.06
UPF3A-206ENST00000480362 PPA2Q9H2U2 334 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 ETAA1Q9NY74 926 aa14.7□□□□□ -0.06
UPF3A-206ENST00000480362 RBMX2Q9Y388 322 aaKnown RBP14.7□□□□□ -0.06
UPF3A-206ENST00000480362 LINC00854A0A1B0GVQ3 168 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ZMYND11Q15326 602 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ATPAF1Q5TC12 328 aaPredicted RBP14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF57Q68EA5 555 aaPredicted RBP14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF787Q6DD87 383 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 HIST2H2BCQ6DN03 193 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF788Q6ZQV5 615 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 PEG10Q86TG7 708 aaKnown RBP14.69□□□□□ -0.06
UPF3A-206ENST00000480362 GVQW1Q8N7I0 195 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ASCC1Q8N9N2 400 aaKnown RBP14.69□□□□□ -0.06
UPF3A-206ENST00000480362 OR4S1Q8NGB4 309 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 NRGNQ92686 78 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 CCL13Q99616 98 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 OCSTAMPQ9BR26 566 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 TMEM165Q9HC07 324 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 MAB21L2Q9Y586 359 aa14.69□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF737O75373 536 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 GSTT2BP0CG30 244 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 CBX5P45973 191 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 BTG1P62324 171 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 SSBP1Q04837 148 aaKnown RBP14.68□□□□□ -0.06
UPF3A-206ENST00000480362 SHEQ5VZ18 495 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 C17orf107Q6ZR85 190 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 TOMM5Q8N4H5 51 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 PLPPR1Q8TBJ4 325 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 SDSLQ96GA7 329 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 SNX22Q96L94 193 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 GAFA1Q96PS6 74 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 ST6GALNAC5Q9BVH7 336 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 CHST6Q9GZX3 395 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF665Q9H7R5 613 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 CHODLQ9H9P2 273 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 MYOZ1Q9NP98 299 aaPredicted RBP14.68□□□□□ -0.06
UPF3A-206ENST00000480362 IFT46Q9NQC8 304 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 ING3Q9NXR8 418 aa14.68□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF230Q9UIE0 474 aaPredicted RBP14.68□□□□□ -0.06
UPF3A-206ENST00000480362 SPTAN1Q13813 2472 aaKnown RBP14.68□□□□□ -0.06
UPF3A-206ENST00000480362 HRNRQ86YZ3 2850 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-206ENST00000480362 TNFRSF13BO14836 293 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-206ENST00000480362 RCVRNP35243 200 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 MDH2P40926 338 aaKnown RBP14.67□□□□□ -0.06
UPF3A-206ENST00000480362 OR3A1P47881 315 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 KRTAP10-9P60411 292 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 ACTBP60709 375 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 ACTG1P63261 375 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 ATXN7L3Q14CW9 347 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-206ENST00000480362 CARTPTQ16568 116 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 AVPI1Q5T686 147 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF561Q8N587 486 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 ZNRF1Q8ND25 227 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 PPP1R35Q8TAP8 253 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 MAFIPQ8WZ33 124 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 RAB1CQ92928 201 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 TMEM246Q9BRR3 403 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 SHARPINQ9H0F6 387 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 DNTTIP1Q9H147 329 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 CHMP1AQ9HD42 196 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-206ENST00000480362 C12orf4Q9NQ89 552 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF701Q9NV72 531 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-206ENST00000480362 TAS2R8Q9NYW2 309 aa14.67□□□□□ -0.06
UPF3A-206ENST00000480362 A0A1B0GW55 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 ANKRD20A5PA0PJZ0 165 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 ISPDA4D126 451 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 NKX6-3A6NJ46 265 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 K7N7A8 449 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 PLA2G10O15496 165 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 PPIHO43447 177 aaKnown RBP14.66□□□□□ -0.06
UPF3A-206ENST00000480362 FSTL3O95633 263 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 ECDO95905 644 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-206ENST00000480362 IGHV2-70P01814 119 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 IGHV4-39P01824 125 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 FCGR3AP08637 254 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 CSF1P09603 554 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L2P0CJ85 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L3P0CJ86 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L4P0CJ87 422 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L5P0CJ88 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L6P0CJ89 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L7P0CJ90 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DTYMKP23919 212 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 KCNJ3P48549 501 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 TMEM33P57088 247 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 KLF9Q13886 244 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-206ENST00000480362 GRK1Q15835 563 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms