RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 HTR1DP28221 377 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 DNLZQ5SXM8 178 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 FAM109BQ6ICB4 259 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 Q6ZN92 141 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 MYPOPQ86VE0 399 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SAP30LQ9HAJ7 183 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 HSPB8Q9UJY1 196 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ARL2-SNX15V9GYD0 113 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF318Q5VUA4 2279 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF142P52746 1687 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SMPD2O60906 423 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SEMA7AO75326 666 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 CXorf1O96002 111 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 COX5BP10606 129 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 NDUFB7P17568 137 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 FCER1GP30273 86 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 CCR2P41597 374 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 TIAL1Q01085 375 aaKnown RBP eCLIP5.43□□□□□ -1.548e-6■■■□□ 19.2
PRPF4B-205ENST00000480058 NHLH2Q02577 135 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SKP2Q13309 424 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SP6Q3SY56 376 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF468Q5VIY5 522 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 OR4A47Q6IF82 309 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 UBALD2Q8IYN6 164 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 GRAMD2BQ96HH9 432 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 C6orf106Q9H6K1 298 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 MTCH2Q9Y6C9 303 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 RREB1Q92766 1687 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 CACNA1GO43497 2377 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 LOC390937A0A1W2PQ73 354 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SIRPB1O00241 398 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 CYR61O00622 381 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 PIAS2O75928 621 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 CRYABP02511 175 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 B4GALT1P15291 398 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF32P17041 273 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 C9orf152Q5JTZ5 239 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 FAM78BQ5VT40 261 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 PRR27Q6MZM9 219 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 GLCCI1Q86VQ1 547 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 SAXO1Q8IYX7 474 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ING1Q9UK53 422 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF835Q9Y2P0 537 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 WIPI2Q9Y4P8 454 aa5.43□□□□□ -1.54
PRPF4B-205ENST00000480058 PLCH1Q4KWH8 1693 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TCRBV16S1A1N1A0A5B0 115 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 C5orf49A4QMS7 147 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 GRPP07492 148 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 EPHA8P29322 1005 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 RPS16P62249 146 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 NHLH1Q02575 133 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 CD226Q15762 336 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 GABRA6Q16445 453 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 RNF151Q2KHN1 245 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 OR1L1Q8NH94 360 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 MCHR2Q969V1 340 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 C1RLQ9NZP8 487 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 CNOT1A5YKK6 2376 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 UBE2L5PA0A1B0GUS4 154 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 HS3ST1O14792 307 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 CHST1O43916 411 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 PRDX4Q13162 271 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 PLPPR5Q32ZL2 321 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF260Q3ZCT1 412 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TMEM230Q96A57 120 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 VN1R1Q9GZP7 353 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TMEM222Q9H0R3 208 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TIMM9Q9Y5J7 89 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 A0A087WWC5 75 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TMEM210A6NLX4 147 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 NCBP2LA6PVI3 153 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 KIAA1324LA8MWY0 1029 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 H0Y980 276 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 ACAA2P42765 397 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 HERVK_113P61574 105 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 MESTQ5EB52 335 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 CYP2G1PQ6ZSU1 146 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 REC114Q7Z4M0 266 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 MYEOVQ96EZ4 313 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 SFRP2Q96HF1 295 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 ZMIZ1Q9ULJ6 1067 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 PPP1R3CQ9UQK1 317 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TRAV8-7A0A075B6U6 113 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 IGHV1OR21-1A0A087WYE8 117 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TNFSF12O43508 249 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 BGLAPP02818 100 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 HOXD4P09016 255 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 CXCL2P19875 107 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TSPAN7P41732 249 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 B2MP61769 119 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 UBE2L3P68036 154 aaKnown RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 SMAGPQ0VAQ4 97 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 TRIM61Q5EBN2 209 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 OR2I1PQ8NGU4 316 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 ZNF775Q96BV0 537 aaPredicted RBP5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 SLC25A38Q96DW6 304 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 PGLYRP3Q96LB9 341 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 MOGAT1Q96PD6 335 aa5.42□□□□□ -1.54
PRPF4B-205ENST00000480058 PMCHL2Q9BQD1 86 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms