RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KLRD1Q13241 179 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF273Q14593 569 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 C11orf91Q3C1V1 193 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 PAN3Q58A45 887 aaKnown RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 GLT8D1Q68CQ7 371 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 ELP2Q6IA86 826 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 METAP1DQ6UB28 335 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 TRAPPC6BQ86SZ2 158 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 LRRTM1Q86UE6 522 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 OSR2Q8N2R0 312 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 LY6G5BQ8NDX9 201 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 OR4S1Q8NGB4 309 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 C8orf46Q8TAG6 207 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 FAM46BQ96A09 425 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 SNX22Q96L94 193 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 TBX15Q96SF7 602 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 MS4A7Q9GZW8 240 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 KCNK15Q9H427 330 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF581Q9P0T4 197 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 NUP50Q9UKX7 468 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 KPTNQ9Y664 436 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 A0A1W2PRD5 423 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 MEGF11A6BM72 1044 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 SLC33A1O00400 549 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 GEMIN2O14893 280 aaKnown RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 CRTAPO75718 401 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 GTF2F2P13984 249 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 BLMHQ13867 455 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 C22orf42Q6IC83 251 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 Q6P435 159 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 BCL6BQ8N143 479 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 KIR3DL3Q8N743 410 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 CHST4Q8NCG5 386 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 TSPAN14Q8NG11 270 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 OR5D13Q8NGL4 314 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 PPP1R35Q8TAP8 253 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 PHYHIPQ92561 330 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 UQCC2Q9BRT2 126 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 CENPOQ9BU64 300 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 BANF2Q9H503 90 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 PLGRKTQ9HBL7 147 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 IL36GQ9NZH8 169 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 AK6Q9Y3D8 172 aaKnown RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 SOX21Q9Y651 276 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 TRAV24A0A0B4J272 114 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 A0A0G2JK05 382 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 CENPVL3A0A0U1RRI6 287 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 MDFIC2A0A1B0GVS7 189 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 A0A1W2PPH5 198 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 M0R1W7 72 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 MGST3O14880 152 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 TCF21O43680 179 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF780AO75290 641 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 MGMTP16455 207 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 MYL9P24844 172 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 FPR2P25090 351 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ERVFRD-1P60508 538 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 AESQ08117 197 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 IL13RA2Q14627 380 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 P2RY14Q15391 338 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 TAF9Q16594 264 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 KRBOX4Q5JUW0 171 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ATAD3CQ5T2N8 411 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ASCL4Q6XD76 172 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF782Q6ZMW2 699 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 Q8N7P7 452 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 TMEM104Q8NE00 496 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 OR51T1Q8NGJ9 327 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 TBC1D15Q8TC07 691 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 NEK7Q8TDX7 302 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF418Q8TF45 676 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 SELENOIQ9C0D9 397 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 METTL8Q9H825 291 aaKnown RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 VCX3AQ9NNX9 186 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 PCDHB16Q9NRJ7 776 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 A0A087WXM4 84 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 LOC100506127A0A0U1RQW1 187 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 hADV38S2A0JD32 116 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 SMIM30A4D0T7 59 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 MPIG6BO95866 241 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 COX7A1P24310 79 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 HTR2CP28335 458 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 GLP1RP43220 463 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 GLIPR1P48060 266 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 P2RX3P56373 397 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 GPR176Q14439 515 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 OR10K2Q6IF99 312 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 BRICD5Q6PL45 260 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 TCF23Q7RTU1 214 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 LYPD6Q86Y78 171 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 CDH26Q8IXH8 852 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 PNKDQ8N490 385 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 SIGLECL1Q8N7X8 197 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 SUMF2Q8NBJ7 301 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 FOXRED1Q96CU9 486 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 COQ2Q96H96 371 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms