RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 FOXRED2Q8IWF2 684 aa16.14■□□□□ 0.17
VPS36-203ENST00000475375 DRAM1Q8N682 238 aa16.14■□□□□ 0.17
VPS36-203ENST00000475375 OR5M8Q8NGP6 311 aa16.14■□□□□ 0.17
VPS36-203ENST00000475375 CANT1Q8WVQ1 401 aa16.14■□□□□ 0.17
VPS36-203ENST00000475375 ASB9Q96DX5 294 aa16.14■□□□□ 0.17
VPS36-203ENST00000475375 HMG20AQ9NP66 347 aa16.14■□□□□ 0.17
VPS36-203ENST00000475375 AMMECR1Q9Y4X0 333 aaPredicted RBP16.14■□□□□ 0.17
VPS36-203ENST00000475375 OCM2P0CE71 109 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 OCMP0CE72 109 aaPredicted RBP16.13■□□□□ 0.17
VPS36-203ENST00000475375 DEFB136Q30KP8 78 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 UTF1Q5T230 341 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 C9orf66Q5T8R8 295 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 CCDC54Q8NEL0 328 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 DNAAF1Q8NEP3 725 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 OR9G1Q8NH87 305 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 PP6455Q8WZ26 134 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 HRASLS5Q96KN8 279 aa16.13■□□□□ 0.17
VPS36-203ENST00000475375 LOC107986453A0A1B0GWG9 222 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A18PA6NE21 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A16PA6NEW6 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A20PA6NIJ5 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A9PA6NNJ1 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A12PA8MX19 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A5PA8MXJ8 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 IGHV3-7P01780 117 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A15PP0C7V4 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A13PP0C7W8 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A14PP0C7W9 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 FAM90A24PP0C7X0 464 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 PTGES3Q15185 160 aaKnown RBP16.12■□□□□ 0.17
VPS36-203ENST00000475375 STPG2Q8N412 459 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 TCEANCQ8N8B7 351 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 MUC7Q8TAX7 377 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 RFT1Q96AA3 541 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 TENM2Q9NT68 2774 aa16.12■□□□□ 0.17
VPS36-203ENST00000475375 A0A087X0M5 115 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 A0A1B0GX30 115 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 ZNF729A6NN14 1252 aaPredicted RBP16.11■□□□□ 0.17
VPS36-203ENST00000475375 SEC14L6B5MCN3 397 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 FGF16O43320 207 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 PRKACBP22694 351 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 PDZK1IP1Q13113 114 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 ATXN7L3Q14CW9 347 aaPredicted RBP16.11■□□□□ 0.17
VPS36-203ENST00000475375 CASC10Q5T4H9 136 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 NXNL2Q5VZ03 156 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 TEX38Q6PEX7 206 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 LHFPL2Q6ZUX7 228 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 OR8U1Q8NH10 309 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 DNAJC9Q8WXX5 260 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 LEAP2Q969E1 77 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 C10orf35Q96D05 121 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 NSL1Q96IY1 281 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 NEK6Q9HC98 313 aa16.11■□□□□ 0.17
VPS36-203ENST00000475375 METTL15A6NJ78 407 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 LY86O95711 162 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 IGKV1D-33P01593 117 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 IGKV1-33P01594 117 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 RPLP1P05386 114 aaKnown RBP16.1■□□□□ 0.17
VPS36-203ENST00000475375 ZNF20P17024 532 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 ATF1P18846 271 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 GLP1RP43220 463 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 C17orf58Q2M2W7 97 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 AADACL4Q5VUY2 407 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 LCNL1Q6ZST4 164 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 RDH10Q8IZV5 341 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 Q8NFD4 153 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 TMEM163Q8TC26 289 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 ADAT3Q96EY9 351 aaPredicted RBP16.1■□□□□ 0.17
VPS36-203ENST00000475375 COQ2Q96H96 371 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 KIRREL1Q96J84 757 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 IL4I1Q96RQ9 567 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 DCLRE1BQ9H816 532 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 OR6C3Q9NZP0 311 aa16.1■□□□□ 0.17
VPS36-203ENST00000475375 IGKV1-9A0A0C4DH69 117 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 KBTBD11-OT1A0A1B0GTJ5 212 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 A0A1W2PPI3 338 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 A0A1W2PQL4 384 aaPredicted RBP16.09■□□□□ 0.17
VPS36-203ENST00000475375 J3QR06 171 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 APOL3O95236 402 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 FAM107AO95990 144 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 IGHG2P01859 326 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 UBCP0CG48 685 aaKnown RBP16.09■□□□□ 0.17
VPS36-203ENST00000475375 MADCAM1Q13477 382 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 LTC4SQ16873 150 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 CXorf66Q5JRM2 361 aaPredicted RBP16.09■□□□□ 0.17
VPS36-203ENST00000475375 GID4Q8IVV7 300 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 PRSS35Q8N3Z0 413 aa16.09■□□□□ 0.17
VPS36-203ENST00000475375 PPIL3Q9H2H8 161 aaKnown RBP16.09■□□□□ 0.17
VPS36-203ENST00000475375 DYNC2H1Q8NCM8 4307 aaKnown RBP16.09■□□□□ 0.17
VPS36-203ENST00000475375 IGKV1-12A0A0C4DH73 117 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 AQP12BA6NM10 295 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 NCBP2LA6PVI3 153 aaKnown RBP16.08■□□□□ 0.16
VPS36-203ENST00000475375 HSPB6O14558 160 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 DEGS1O15121 323 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 IGKV1D-12P01611 117 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 CSN2P05814 226 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 HOXB6P17509 224 aaKnown RBP16.08■□□□□ 0.16
VPS36-203ENST00000475375 GNG10P50151 68 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 RAB7AP51149 207 aa16.08■□□□□ 0.16
VPS36-203ENST00000475375 DIAPH2-AS1Q14236 149 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms