RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RBP4P02753 201 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 KCNJ3P48549 501 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
SCAF11-206ENST00000474828 PIGYQ3MUY2 71 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 SLC22A6Q4U2R8 563 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 AWAT2Q6E213 333 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 GDPGP1Q6ZNW5 385 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 TCF23Q7RTU1 214 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 ASCC1Q8N9N2 400 aaKnown RBP13.92□□□□□ -0.18
SCAF11-206ENST00000474828 TMEM104Q8NE00 496 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 PPP1R35Q8TAP8 253 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 CORO2AQ92828 525 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 S100A13Q99584 98 aa13.92□□□□□ -0.18
SCAF11-206ENST00000474828 TMEM14DPA8MWL7 114 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 DEGS1O15121 323 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 BPNT1O95861 308 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 CSTBP04080 98 aaKnown RBP13.91□□□□□ -0.18
SCAF11-206ENST00000474828 VSIG8P0DPA2 414 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 PRTN3P24158 256 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 HTR2CP28335 458 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 P2RX3P56373 397 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 ARF6P62330 175 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 PDCD1Q15116 288 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 GRK1Q15835 563 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 H1FXQ92522 213 aaKnown RBP13.91□□□□□ -0.18
SCAF11-206ENST00000474828 YIPF6Q96EC8 236 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 Q96M66 194 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 VCX3AQ9NNX9 186 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 NUP50Q9UKX7 468 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 V9GY05 133 aa13.91□□□□□ -0.18
SCAF11-206ENST00000474828 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 SIRPB1O00241 398 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 GEMIN2O14893 280 aaKnown RBP13.9□□□□□ -0.18
SCAF11-206ENST00000474828 LDLRAD4O15165 306 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 TOX4O94842 621 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 GLAP06280 429 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 CD36P16671 472 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 SERPINA2P20848 420 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 GABRR1P24046 479 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 RANBP1P43487 201 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 METTL11BQ5VVY1 283 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 C22orf42Q6IC83 251 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 GDPD3Q7L5L3 318 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 TPRA1Q86W33 373 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 NR2C2APQ86WQ0 139 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 PRIMA1Q86XR5 153 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 GAPTQ8N292 157 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 COQ2Q96H96 371 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 TM2D1Q9BX74 207 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 CST11Q9H112 138 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 PRDM13Q9H4Q3 707 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 METTL8Q9H825 291 aaKnown RBP13.9□□□□□ -0.18
SCAF11-206ENST00000474828 AK6Q9Y3D8 172 aaKnown RBP13.9□□□□□ -0.18
SCAF11-206ENST00000474828 LINC00312Q9Y6C7 94 aa13.9□□□□□ -0.18
SCAF11-206ENST00000474828 CENPVL3A0A0U1RRI6 287 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 A0A1W2PPH5 198 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 PDCD5O14737 125 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 CGB3P0DN86 165 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 CGB7P0DN87 165 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 IGHV4-38-2P0DP08 117 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF44P15621 663 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 MGMTP16455 207 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 GADD45AP24522 165 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 SRP14P37108 136 aaKnown RBP13.89□□□□□ -0.19
SCAF11-206ENST00000474828 SNU13P55769 128 aaKnown RBP13.89□□□□□ -0.19
SCAF11-206ENST00000474828 SCGB2A2Q13296 93 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 UNC119Q13432 240 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF273Q14593 569 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 OR2W3Q7Z3T1 314 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 FAM89BQ8N5H3 189 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 KCNG3Q8TAE7 436 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 CHST6Q9GZX3 395 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 LINC00574Q9H8X3 128 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 SPACA1Q9HBV2 294 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF581Q9P0T4 197 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 SSR3Q9UNL2 185 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 JMJD1CQ15652 2540 aa13.89□□□□□ -0.19
SCAF11-206ENST00000474828 DSCAML1Q8TD84 2053 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 hADV38S2A0JD32 116 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 FUOMA2VDF0 154 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 H3BUI4 141 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 EPHA1P21709 976 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 MYL9P24844 172 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 RPS27AP62979 156 aaKnown RBP13.88□□□□□ -0.19
SCAF11-206ENST00000474828 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 HCP5Q6MZN7 132 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 VMO1Q7Z5L0 202 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 OR4M1Q8NGD0 313 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 UBE2J1Q9Y385 318 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-206ENST00000474828 BOLA1Q9Y3E2 137 aa13.88□□□□□ -0.19
SCAF11-206ENST00000474828 A0A1W2PQ09 198 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 ODAMA1E959 279 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 FOXI3A8MTJ6 420 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-206ENST00000474828 AIPO00170 330 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF728P0DKX0 622 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms