RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 BTN2A1Q7KYR7 527 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 OVCH2Q7RTZ1 564 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 DTX2Q86UW9 622 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 LHFPL1Q86WI0 220 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 GVQW1Q8N7I0 195 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 OR4C16Q8NGL9 310 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ITLN1Q8WWA0 313 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 NEUROG1Q92886 237 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 CREB3L1Q96BA8 519 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 UPRTQ96BW1 309 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 CACNG6Q9BXT2 260 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ALX4Q9H161 411 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 DPAGT1Q9H3H5 408 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 NCOR1P1Q9H4R4 102 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 MYOZ1Q9NP98 299 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 DECR2Q9NUI1 292 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 C1orf123Q9NWV4 160 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 CISD1Q9NZ45 108 aaKnown RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 NLKQ9UBE8 527 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 IL36RNQ9UBH0 155 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 AK3Q9UIJ7 227 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF222Q9UK12 451 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 NPTNQ9Y639 398 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 HCFC1P51610 2035 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 DOPEY1Q5JWR5 2465 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 SETXQ7Z333 2677 aaKnown RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 CACNA1DQ01668 2161 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 HEATR1Q9H583 2144 aaKnown RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ICE1Q9Y2F5 2266 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 TENM4Q6N022 2769 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 A0A0B4J293 547 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 LINC00854A0A1B0GVQ3 168 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 FUOMA2VDF0 154 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 C7orf66A4D0T2 115 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MCRIP1C9JLW8 97 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 C19orf84I3L1E1 186 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 SH2D1BO14796 132 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 TNFRSF13BO14836 293 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 DEGS1O15121 323 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 SPRY3O43610 288 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 NXPH2O95156 264 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 DIRAS3O95661 229 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 RAB3DO95716 219 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR2H2O95918 312 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 HAND1O96004 215 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 FCGR3AP08637 254 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 DANCRP0C864 163 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 PSG2P11465 335 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 EGR1P18146 543 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 TNFRSF1AP19438 455 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 AMY2BP19961 511 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 GLRA1P23415 457 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 GIFP27352 417 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MDH2P40926 338 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 PPOXP50336 477 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 TNFAIP6P98066 277 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ARFRP1Q13795 201 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 RBM39Q14498 530 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 GRK1Q15835 563 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 CR1LQ2VPA4 569 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 SMIM21Q3B7S5 101 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 RNASE12Q5GAN4 147 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ATPAF1Q5TC12 328 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF660Q6AZW8 331 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 FIP1L1Q6UN15 594 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 PLET1Q6UQ28 207 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 DHRS11Q6UWP2 260 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF497Q6ZNH5 498 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MUC15Q8N387 334 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ARRDC1Q8N5I2 433 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 SUMF2Q8NBJ7 301 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR4S1Q8NGB4 309 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR5AP2Q8NGF4 316 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR4D10Q8NGI6 311 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR13C8Q8NGS7 320 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR4K15Q8NH41 348 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 OR56B4Q8NH76 319 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ENKURQ8TC29 256 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 LRRC29Q8WV35 223 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 IGFBPL1Q8WX77 278 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MRGPRFQ96AM1 343 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MED30Q96HR3 178 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 CMSS1Q9BQ75 279 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 SLC25A21Q9BQT8 299 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 DPCDQ9BVM2 203 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 WDR13Q9H1Z4 485 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MMP28Q9H239 520 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 Q9N2K0 584 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 C12orf4Q9NQ89 552 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 MBNL3Q9NUK0 354 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 RNF7Q9UBF6 113 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 WIPI2Q9Y4P8 454 aa5.55□□□□□ -1.52
ATG4A-207ENST00000474825 DIDO1Q9BTC0 2240 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 ASH1LQ9NR48 2969 aaKnown RBP5.55□□□□□ -1.52
ATG4A-207ENST00000474825 IGKV1D-17A0A075B6S4 117 aa5.54□□□□□ -1.52
ATG4A-207ENST00000474825 IGKV1D-8A0A087WSZ0 117 aa5.54□□□□□ -1.52
ATG4A-207ENST00000474825 A0A1W2PPR1 153 aa5.54□□□□□ -1.52
ATG4A-207ENST00000474825 MEIS3P1A6NDR6 274 aa5.54□□□□□ -1.52
ATG4A-207ENST00000474825 A6NLC8 198 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms