RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PIGPP57054 158 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 ERVS71-1P61550 626 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 NAAAQ02083 359 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 PSG7Q13046 419 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 KIR2DS1Q14954 304 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 HERPUD1Q15011 391 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 ZNF146Q15072 292 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 P2RY6Q15077 328 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 C3orf36Q3SXR2 165 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 SPATA46Q5T0L3 261 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 COMMD7Q86VX2 200 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 LDLRAD3Q86YD5 345 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 FAM185AQ8N0U4 392 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 BATF2Q8N1L9 274 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 CNEP1R1Q8N9A8 125 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 CCDC71LQ8N9Z2 235 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 SUMF2Q8NBJ7 301 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 OR1J1Q8NGS3 322 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 MSI2Q96DH6 328 aaKnown RBP8.35□□□□□ -1.07
USP39-214ENST00000474572 C18orf12Q96KH6 178 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 AQP10Q96PS8 301 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 ARPC5LQ9BPX5 153 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 NRIP2Q9BQI9 281 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 ADAT1Q9BUB4 502 aaKnown RBP8.35□□□□□ -1.07
USP39-214ENST00000474572 REG4Q9BYZ8 158 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 TLNRD1Q9H1K6 362 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 OR51B6Q9H340 312 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 HES4Q9HCC6 221 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 SLC2A9Q9NRM0 540 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 RASL12Q9NYN1 266 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 PROCRQ9UNN8 238 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 POLDIP2Q9Y2S7 368 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 KCNIP3Q9Y2W7 256 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 AMDHD2Q9Y303 409 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 ESPL1Q14674 2120 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 A0A1W2PR80 420 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 hCG_1807616A0A1W2PRN6 198 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 OR5H1A6NKK0 313 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 TRDCB7Z8K6 153 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 H7C1Q1 480 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 CRYABP02511 175 aaKnown RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 RLN2P04090 185 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 WNT2P09544 360 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 OR5AC1P0C628 307 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 CECR9P0C854 216 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 PET100P0DJ07 73 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 IL32P24001 234 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 HOXC12P31275 282 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 MPV17P39210 176 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 P2RX3P56373 397 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 HLA-DRB3P79483 266 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 ZNF154Q13106 437 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 RAB32Q13637 225 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 TSC22D1Q15714 1073 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 AANATQ16613 207 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 ALKBH6Q3KRA9 238 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 IGSF11Q5DX21 431 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 TOR2AQ5JU69 321 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 C1QTNF12Q5T7M4 302 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 MBNL2Q5VZF2 373 aaKnown RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 ZNF585AQ6P3V2 769 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 PCSK4Q6UW60 755 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 UNQ6126/PRO20091Q6UXV3 157 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 LIAT1Q6ZQX7 453 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 BEND4Q6ZU67 534 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 ASCL5Q7RTU5 278 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 CXorf67Q86X51 503 aaPredicted RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 ZNF610Q8N9Z0 462 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 SCCPDHQ8NBX0 429 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 OR8G5Q8NG78 346 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 OR1S1Q8NH92 325 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 KLF14Q8TD94 323 aaPredicted RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 RTN4IP1Q8WWV3 396 aaPredicted RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 TOMM40LQ969M1 308 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 RRNAD1Q96FB5 475 aaKnown RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 ZNF488Q96MN9 340 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 CITED4Q96RK1 184 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 BCL2L14Q9BZR8 327 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 SLC25A32Q9H2D1 315 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 METTL8Q9H825 291 aaKnown RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 OR5AC2Q9NZP5 309 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 PURGQ9UJV8 347 aaKnown RBP8.34□□□□□ -1.07
USP39-214ENST00000474572 MEMO1Q9Y316 297 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 FAM215AQ9Y5M1 114 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 SLC25A15Q9Y619 301 aa8.34□□□□□ -1.07
USP39-214ENST00000474572 FREM2Q5SZK8 3169 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 IGHV1-18A0A0C4DH31 117 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 IGKV1-6A0A0C4DH72 117 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 MLNRO43193 412 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 KLK10O43240 276 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 SPDEFO95238 335 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 SLC34A2O95436 690 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 DIRAS3O95661 229 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 HOXB5P09067 269 aa8.33□□□□□ -1.08
USP39-214ENST00000474572 SCTP09683 121 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms