RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 NAT1P18440 290 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 LMO1P25800 156 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 TAS2R19P59542 299 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 HOXA4Q00056 320 aaPredicted RBP17.11■□□□□ 0.33
CDHR3-210ENST00000474330 NRARPQ7Z6K4 114 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 GVQW1Q8N7I0 195 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 SUMF2Q8NBJ7 301 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 CMSS1Q9BQ75 279 aaKnown RBP17.11■□□□□ 0.33
CDHR3-210ENST00000474330 SEBOXQ9HB31 216 aaPredicted RBP17.11■□□□□ 0.33
CDHR3-210ENST00000474330 HRASLSQ9HDD0 168 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 IFT46Q9NQC8 304 aa17.11■□□□□ 0.33
CDHR3-210ENST00000474330 UBE2QL1A1L167 161 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 NAP1L6A6NFF2 107 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 HAND1O96004 215 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 C11orf71Q6IPW1 123 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 DTX2Q86UW9 622 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 HPS1Q92902 700 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 TANC2Q9HCD6 1990 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 SSX4O60224 188 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 CD8AP01732 235 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 FCER2P06734 321 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 AKAIN1P0CW23 69 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 IRF2P14316 349 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 RBMXP38159 391 aaKnown RBP17.1■□□□□ 0.33
CDHR3-210ENST00000474330 MRPS15P82914 257 aaKnown RBP17.1■□□□□ 0.33
CDHR3-210ENST00000474330 RBM39Q14498 530 aaKnown RBP17.1■□□□□ 0.33
CDHR3-210ENST00000474330 HOGA1Q86XE5 327 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 DPCDQ9BVM2 203 aaPredicted RBP17.1■□□□□ 0.33
CDHR3-210ENST00000474330 NLKQ9UBE8 527 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 OR14J1Q9UGF5 321 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 VPS13CQ709C8 3753 aa17.1■□□□□ 0.33
CDHR3-210ENST00000474330 DSCAMO60469 2012 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 IFNL4K9M1U5 179 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 SLC33A1O00400 549 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-210ENST00000474330 CD74P04233 296 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 CD3DP04234 171 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 DTYMKP23919 212 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 BTCP35070 178 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 FAUP35544 74 aaKnown RBP17.09■□□□□ 0.33
CDHR3-210ENST00000474330 STEAP1BQ6NZ63 245 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 Q6ZNX1 250 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 RDH5Q92781 318 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 HDHD3Q9BSH5 251 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-210ENST00000474330 CHST6Q9GZX3 395 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 CLEC4MQ9H2X3 399 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-210ENST00000474330 WIPI2Q9Y4P8 454 aa17.09■□□□□ 0.33
CDHR3-210ENST00000474330 RFPL4AA6NLU0 287 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 LRRC30A6NM36 301 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 ZNF736B4DX44 427 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-210ENST00000474330 RFPL4AL1F8VTS6 287 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 CYB5R3P00387 301 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-210ENST00000474330 MT-ND4P03905 459 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 SOD3P08294 240 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 PSG2P11465 335 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 SLC6A1P30531 599 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 SHEQ5VZ18 495 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 CCBE1Q6UXH8 406 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-210ENST00000474330 BOLLQ8N9W6 283 aaKnown RBP17.08■□□□□ 0.32
CDHR3-210ENST00000474330 DUSP18Q8NEJ0 188 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 OR4S1Q8NGB4 309 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 ENKURQ8TC29 256 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 DYRK2Q92630 601 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 VRK1Q99986 396 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-210ENST00000474330 UBTD1Q9HAC8 227 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 C12orf4Q9NQ89 552 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 TREM2Q9NZC2 230 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 DNAJB11Q9UBS4 358 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 EDARQ9UNE0 448 aa17.08■□□□□ 0.32
CDHR3-210ENST00000474330 FAM240BA0A1B0GVZ2 78 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 OR2AT4A6NND4 320 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 SIRPB1O00241 398 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 HSPB6O14558 160 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 HPXP02790 462 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 SPNP16150 400 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 TBPP20226 339 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 HLA-DMAP28067 261 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 PAN3Q58A45 887 aaKnown RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 OR52W1Q6IF63 320 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 TGIF2LYQ8IUE0 185 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 BPIFB2Q8N4F0 458 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 OR4C16Q8NGL9 310 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 NEK7Q8TDX7 302 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 SNAPC3Q92966 411 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 TRAF4Q9BUZ4 470 aaPredicted RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 ST6GALNAC5Q9BVH7 336 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 ZNF230Q9UIE0 474 aaPredicted RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 MAP1AP78559 2803 aaPredicted RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 FCGR3AP08637 254 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 PRDX2P32119 198 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 CEBPDP49716 269 aaPredicted RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 C1orf87Q8N0U7 546 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 BEST4Q8NFU0 473 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 NRGNQ92686 78 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 RIMS4Q9H426 269 aaPredicted RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 ZNF701Q9NV72 531 aaPredicted RBP17.07■□□□□ 0.32
CDHR3-210ENST00000474330 ETAA1Q9NY74 926 aa17.07■□□□□ 0.32
CDHR3-210ENST00000474330 AKAP6Q13023 2319 aa17.06■□□□□ 0.32
CDHR3-210ENST00000474330 IGKV1D-17A0A075B6S4 117 aa17.06■□□□□ 0.32
CDHR3-210ENST00000474330 TMEM178BH3BS89 294 aa17.06■□□□□ 0.32
CDHR3-210ENST00000474330 RAB3DO95716 219 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms