RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 RBM48Q5RL73 367 aaKnown RBP11.63□□□□□ -0.55
VAMP4-203ENST00000474047 ZNF782Q6ZMW2 699 aaPredicted RBP11.63□□□□□ -0.55
VAMP4-203ENST00000474047 DERL3Q96Q80 235 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 DUSP21Q9H596 190 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 POMT1Q9Y6A1 747 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 LINC00312Q9Y6C7 94 aa11.63□□□□□ -0.55
VAMP4-203ENST00000474047 TRGV10A0A0A0MS01 117 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 TRBV5-7A0A0A0MS05 114 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 HAX1O00165 279 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 FSTP19883 344 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 SERPINA2P20848 420 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 CRHBPP24387 322 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 LMO1P25800 156 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 ERP29P30040 261 aaKnown RBP11.62□□□□□ -0.55
VAMP4-203ENST00000474047 P2RX3P56373 397 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 AESQ08117 197 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 DOC2BQ14184 412 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 MIDNQ504T8 468 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 ACSM3Q53FZ2 586 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 PAN3Q58A45 887 aaKnown RBP11.62□□□□□ -0.55
VAMP4-203ENST00000474047 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 OR13D1Q8NGV5 346 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 UFD1Q92890 307 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
VAMP4-203ENST00000474047 C17orf98A8MV24 154 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 SLC33A1O00400 549 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-203ENST00000474047 HSPB6O14558 160 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 ZNF780AO75290 641 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-203ENST00000474047 FOXL1Q12952 345 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 GPR176Q14439 515 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 IRF3Q14653 427 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 SLC22A6Q4U2R8 563 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 KRBOX4Q5JUW0 171 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 Q6P435 159 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 ASCL4Q6XD76 172 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 PRSS48Q7RTY5 328 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 OSR2Q8N2R0 312 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 ST3GAL6Q9Y274 331 aa11.61□□□□□ -0.55
VAMP4-203ENST00000474047 UBE2J1Q9Y385 318 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-203ENST00000474047 MEGF11A6BM72 1044 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 RBP4P02753 201 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 IGHV1-8P0DP01 117 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 HKR1P10072 659 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 IER3P46695 156 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 GLIPR1P48060 266 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 DYNC1I2Q13409 638 aaKnown RBP11.6□□□□□ -0.55
VAMP4-203ENST00000474047 GPR50Q13585 617 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 IL13RA2Q14627 380 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 ATXN7L3Q14CW9 347 aaPredicted RBP11.6□□□□□ -0.55
VAMP4-203ENST00000474047 PIGYQ3MUY2 71 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 LIPKQ5VXJ0 399 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 C11orf42Q8N5U0 333 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 OR51T1Q8NGJ9 327 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 MUL1Q969V5 352 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 CHIAQ9BZP6 476 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 GAL3ST2Q9H3Q3 398 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 IL36GQ9NZH8 169 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 MRPS28Q9Y2Q9 187 aaKnown RBP11.6□□□□□ -0.55
VAMP4-203ENST00000474047 LSM2Q9Y333 95 aaKnown RBP11.6□□□□□ -0.55
VAMP4-203ENST00000474047 MAGEA13PA6NCF6 341 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 ARG1P05089 322 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 GTF2F2P13984 249 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 DLX6P56179 175 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 AWAT2Q6E213 333 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 GLIPR1L1Q6UWM5 242 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 CEACAM19Q7Z692 300 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 LDLRAD3Q86YD5 345 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 CDH26Q8IXH8 852 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 NKAIN3Q8N8D7 197 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 TMEM203Q969S6 136 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 BARHL1Q9BZE3 327 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 SLITRK2Q9H156 845 aa11.6□□□□□ -0.55
VAMP4-203ENST00000474047 RRP15Q9Y3B9 282 aaKnown RBP11.6□□□□□ -0.55
VAMP4-203ENST00000474047 ODAMA1E959 279 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 PIN1P1O15428 100 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 OR7C1O76099 320 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-203ENST00000474047 CSN2P05814 226 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 MAP2K4P45985 399 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 INSL4Q14641 139 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 ATAD3CQ5T2N8 411 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 OR6C3Q9NZP0 311 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 ZNRD1Q9P1U0 126 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 SESN1Q9Y6P5 492 aa11.59□□□□□ -0.55
VAMP4-203ENST00000474047 CLPXO76031 633 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
VAMP4-203ENST00000474047 RBM11P57052 281 aaKnown RBP11.58□□□□□ -0.56
VAMP4-203ENST00000474047 TRAM1Q15629 374 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 HSD17B12Q53GQ0 312 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 OR52W1Q6IF63 320 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 LINC00596Q86U02 117 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 ZNF565Q8N9K5 539 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 Q8NFD4 153 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 OR4D6Q8NGJ1 314 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 NEK7Q8TDX7 302 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms