RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIR3DL3Q8N743 410 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 TPRX1Q8N7U7 411 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 UPRTQ96BW1 309 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 GFI1Q99684 422 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 SELENOIQ9C0D9 397 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 SIRPDQ9H106 197 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 ING3Q9NXR8 418 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 IGHV3OR16-10A0A075B7F0 116 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 hCG_1809904A0A1W2PP81 198 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 A0A1W2PPE2 198 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 A0A1W2PR64 198 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 A0A1W2PRV1 198 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 hADV38S2A0JD32 116 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 TRIM64CA6NLI5 447 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 M0R1W7 72 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 BPNT1O95861 308 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 MPIG6BO95866 241 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 IFNA2P01563 188 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 MMP9P14780 707 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 ARSBP15848 533 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 JUNBP17275 347 aaPredicted RBP10.22□□□□□ -0.77
DDX56-209ENST00000473924 HOXB4P17483 251 aaPredicted RBP10.22□□□□□ -0.77
DDX56-209ENST00000473924 EPHA1P21709 976 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 P2RX3P56373 397 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 MEF2CQ06413 473 aaPredicted RBP10.22□□□□□ -0.77
DDX56-209ENST00000473924 AESQ08117 197 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 ATXN7L3Q14CW9 347 aaPredicted RBP10.22□□□□□ -0.77
DDX56-209ENST00000473924 P2RY14Q15391 338 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 HES5Q5TA89 166 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 GPR157Q5UAW9 335 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 VMO1Q7Z5L0 202 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 TRAPPC6BQ86SZ2 158 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 BPIFB2Q8N4F0 458 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 TMEM104Q8NE00 496 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 KCNG3Q8TAE7 436 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 NEK7Q8TDX7 302 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 POM121Q96HA1 1249 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 C1orf147Q96MC9 270 aaPredicted RBP10.22□□□□□ -0.77
DDX56-209ENST00000473924 KCTD7Q96MP8 289 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 OCEL1Q9H607 264 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 NUP50Q9UKX7 468 aa10.22□□□□□ -0.77
DDX56-209ENST00000473924 NIPBLQ6KC79 2804 aaeCLIP10.21□□□□□ -0.77
DDX56-209ENST00000473924 TRAV24A0A0B4J272 114 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 SHISA3A0PJX4 238 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 MEX3AA1L020 520 aaKnown RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 CSN2P05814 226 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 VSIG8P0DPA2 414 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 CD37P11049 281 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 CCL3L1P16619 93 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 FPR2P25090 351 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 ERP29P30040 261 aaKnown RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 CLDN12P56749 244 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 OR10A3P58181 314 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 ZNF273Q14593 569 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 KRBOX4Q5JUW0 171 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 OR10K2Q6IF99 312 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 METAP1DQ6UB28 335 aaPredicted RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 C1orf122Q6ZSJ8 110 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 TPRA1Q86W33 373 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 SUMF2Q8NBJ7 301 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 LHX4Q969G2 390 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 SLC25A28Q96A46 364 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 TBX15Q96SF7 602 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 DPCDQ9BVM2 203 aaPredicted RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 TMEM59Q9BXS4 323 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 MRPS26Q9BYN8 205 aaKnown RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 BARHL1Q9BZE3 327 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 MS4A7Q9GZW8 240 aaPredicted RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 IFT22Q9H7X7 185 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 METTL8Q9H825 291 aaKnown RBP10.21□□□□□ -0.77
DDX56-209ENST00000473924 SPACA1Q9HBV2 294 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 SIRT7Q9NRC8 400 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 STEAP1Q9UHE8 339 aa10.21□□□□□ -0.77
DDX56-209ENST00000473924 SETD2Q9BYW2 2564 aaPredicted RBP10.21□□□□□ -0.78
DDX56-209ENST00000473924 TRGV10A0A0A0MS01 117 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 SMIM30A4D0T7 59 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A10PA6NDY2 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A18PA6NE21 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A16PA6NEW6 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A20PA6NIJ5 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A8PA6NJQ4 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A7PA6NKC0 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A22PA8MWA6 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A12PA8MX19 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A5PA8MXJ8 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A23PA8MXZ1 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 MCRIP1C9JLW8 97 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 H3BUI4 141 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 AIREO43918 545 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FSHBP01225 129 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A15PP0C7V4 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A13PP0C7W8 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A14PP0C7W9 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM90A24PP0C7X0 464 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 SMIM18P0DKX4 95 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 IGHV4-38-2P0DP08 117 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 GLIPR1P48060 266 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 KCNJ3P48549 501 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
DDX56-209ENST00000473924 GDPGP1Q6ZNW5 385 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms