RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PSMF1Q92530 271 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 FER1L6-AS2Q96M78 137 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SCGB3A2Q96PL1 93 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF581Q9P0T4 197 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 LOC102723971A0A1B0GUV8 181 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 LEFTY2O00292 366 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TMPRSS11DO60235 418 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SAP30O75446 220 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 DEDDO75618 318 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 IRF1P10914 325 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 ADRA2CP18825 462 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 PTGER4P35408 488 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SRP14P37108 136 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 CLDN15P56746 228 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TBPL1P62380 186 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SSBP2P81877 361 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 PMP22Q01453 160 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 Q6ZVH6 145 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 PARS2Q7L3T8 475 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 OR5A2Q8NGI9 324 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 STARD4Q96DR4 205 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 MRAP2Q96G30 205 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC35G5Q96KT7 338 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 RASL10BQ96S79 203 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 PDCD1LG2Q9BQ51 273 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 RSPO3Q9BXY4 272 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 HEYLQ9NQ87 328 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 HIF1ANQ9NWT6 349 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 P2RX2Q9UBL9 471 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 COPS7AQ9UBW8 275 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 PILRBQ9UKJ0 227 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 TNFRSF18Q9Y5U5 241 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 LIPGQ9Y5X9 500 aa4.45□□□□□ -1.7
TMEM39A-206ENST00000473684 RIIAD1A6NNX1 92 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CEACAM18A8MTB9 384 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 B4DGG1 531 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 TLX3O43711 291 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 GJB5O95377 273 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 SERPINA7P05543 415 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 MRPL3P09001 348 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 KITLGP21583 273 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 HNRNPA2B1P22626 353 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 GALR1P47211 349 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CCL23P55773 120 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 ARG2P78540 354 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 ZFP36L1Q07352 338 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 FOXL1Q12952 345 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 NFATC4Q14934 902 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 EXOSC7Q15024 291 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 HIST3H3Q16695 136 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 KIAA0895LQ68EN5 471 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CDC42EP5Q6NZY7 148 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 SAXO1Q8IYX7 474 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 MUC15Q8N387 334 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 C5orf17Q8NAS9 161 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 ADAD2Q8NCV1 583 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 OR5AU1Q8NGC0 362 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CLDND2Q8NHS1 167 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 RNF128Q8TEB7 428 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 TSPAN32Q96QS1 320 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 P2RX4Q99571 388 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CITED2Q99967 270 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 HCAR1Q9BXC0 346 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 MTHFD2LQ9H903 347 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 SIRT3Q9NTG7 399 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 ARL15Q9NXU5 204 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 DKK4Q9UBT3 224 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 MMP17Q9ULZ9 603 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 NPIPA5A0A0B4J1W7 369 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 TRBV5-5A0A0J9YX44 114 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 A0A0U1RQK1 487 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 SERINC4A6NH21 518 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 HHLA1C9JL84 531 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 C1QTNF3-AMACRE9PGA6 284 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 NPIPA5E9PKD4 350 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 NPIPA3F8WFD2 350 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 G3V3Y1 287 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 TAX1BP3O14907 124 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 GPR137BO60478 399 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 GJB3O75712 270 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 DDAH2O95865 285 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 IGLC1P0CG04 106 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF43P17038 809 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CSNK1A1P48729 337 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CCL7P80098 99 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 GGTLC2Q14390 218 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 PRTGQ2VWP7 1150 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 ZNF260Q3ZCT1 412 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 TRMT12Q53H54 448 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 MS4A13Q5J8X5 152 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CST9LP1Q5W188 147 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 CCDC144NLQ6NUI1 221 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 HOGA1Q86XE5 327 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC39A11Q8N1S5 342 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 OR2L13Q8N349 312 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 SLC16A11Q8NCK7 471 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 OR2Z1Q8NG97 314 aa4.44□□□□□ -1.7
TMEM39A-206ENST00000473684 OR51L1Q8NGJ5 315 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms