RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SIRT4Q9Y6E7 314 aaPredicted RBP13.38□□□□□ -0.27
USP40-212ENST00000473191 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 ADARB2-AS1A8MUL3 147 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 SULT1B1O43704 296 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 FADS2O95864 444 aaKnown RBP13.37□□□□□ -0.27
USP40-212ENST00000473191 TMEM225BP0DP42 221 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 ETV1P50549 477 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 RAB40BQ12829 278 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 NSUN5P1Q3KNT7 163 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 MINOS1Q5TGZ0 78 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 OR2G6Q5TZ20 316 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 SERPINA12Q8IW75 414 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 CNIH3Q8TBE1 160 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 TSEN15Q8WW01 171 aaKnown RBP13.37□□□□□ -0.27
USP40-212ENST00000473191 CORO2AQ92828 525 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 NR1H4Q96RI1 486 aaPredicted RBP13.37□□□□□ -0.27
USP40-212ENST00000473191 TAS2R4Q9NYW5 299 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 GLS2Q9UI32 602 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 DHDHQ9UQ10 334 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 MINOS1-NBL1R4GNA1 71 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 KIAA2026Q5HYC2 2103 aa13.37□□□□□ -0.27
USP40-212ENST00000473191 ODAMA1E959 279 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 SH2D7A6NKC9 451 aaPredicted RBP13.36□□□□□ -0.27
USP40-212ENST00000473191 TMEM212A6NML5 194 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 FAM90A22PA8MWA6 464 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 F2RL2O00254 374 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 GABRPO00591 440 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 BAG2O95816 211 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 LALBAP00709 142 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 IGLV1-47P01700 117 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 IGHV3-7P01780 117 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 PRB2P02812 416 aaPredicted RBP13.36□□□□□ -0.27
USP40-212ENST00000473191 HTR1DP28221 377 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 DYNLT3P51808 116 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 KRBOX4Q5JUW0 171 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 ZNF691Q5VV52 312 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 ZNF529Q6P280 563 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 SAXO1Q8IYX7 474 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 OR13C5Q8NGS8 318 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 Q96MT0 163 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 CITED2Q99967 270 aaPredicted RBP13.36□□□□□ -0.27
USP40-212ENST00000473191 WNT10AQ9GZT5 417 aa13.36□□□□□ -0.27
USP40-212ENST00000473191 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 TRAV39A0A0B4J263 110 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 H0YJX3 145 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 DEGS1O15121 323 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 MPZL2O60487 215 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 OPN1MWP04001 364 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 GBX2P52951 348 aaPredicted RBP13.35□□□□□ -0.27
USP40-212ENST00000473191 PIGYQ3MUY2 71 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 HEPN1Q6WQI6 88 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 SATL1Q86VE3 508 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 OR5D14Q8NGL3 314 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 OR13A1Q8NGR1 328 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 OCSTAMPQ9BR26 566 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 MMP28Q9H239 520 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 INPP5EQ9NRR6 644 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
USP40-212ENST00000473191 RPL36Q9Y3U8 105 aaKnown RBP13.35□□□□□ -0.27
USP40-212ENST00000473191 FBXO24O75426 580 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 ALX3O95076 343 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 CDRT1O95170 752 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 CSN2P05814 226 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 CGB3P0DN86 165 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 CGB7P0DN87 165 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 OR3A4PP47883 348 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 DOC2BQ14184 412 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 LRRC36Q1X8D7 754 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 BEAN1Q3B7T3 259 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 C11orf88Q6PI97 169 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 PLPPR1Q8TBJ4 325 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 TNFAIP8L1Q8WVP5 186 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 LEAP2Q969E1 77 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 CYYR1Q96J86 154 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 JAM3Q9BX67 310 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 PRSS22Q9GZN4 317 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 GAL3ST2Q9H3Q3 398 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 FGF20Q9NP95 211 aaPredicted RBP13.34□□□□□ -0.27
USP40-212ENST00000473191 TAS2R3Q9NYW6 316 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 DPM3Q9P2X0 92 aa13.34□□□□□ -0.27
USP40-212ENST00000473191 MAGEA13PA6NCF6 341 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 LY6LH3BQJ8 138 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 AMY1AP04745 511 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 AMY2AP04746 511 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 RPSAP08865 295 aaKnown RBP13.33□□□□□ -0.28
USP40-212ENST00000473191 CCDC159P0C7I6 412 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 RAB3AP20336 220 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 CD34P28906 385 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 PTGFRP43088 359 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 BDH1Q02338 343 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 DIAPH2-AS1Q14236 149 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 SAMD5Q5TGI4 173 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 C10orf99Q6UWK7 81 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 OR51T1Q8NGJ9 327 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 MRPL48Q96GC5 212 aaKnown RBP13.33□□□□□ -0.28
USP40-212ENST00000473191 KIRREL1Q96J84 757 aa13.33□□□□□ -0.28
USP40-212ENST00000473191 FAM192AQ9GZU8 254 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms