RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 LINC01619G3V211 115 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PDE6DO43924 150 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PTHP01270 115 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 IGKV1D-16P01601 117 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PRB2P02812 416 aaPredicted RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 EIF4EP06730 217 aaKnown RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 SNRPCP09234 159 aaKnown RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 ESDP10768 282 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 RCC1P18754 421 aaPredicted RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 ADORA2BP29275 332 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC6A1P30531 599 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 RCVRNP35243 200 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 MTPNP58546 118 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 RAB5BP61020 215 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 HIST1H3AP68431 136 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC35A2P78381 396 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 H3F3AP84243 136 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PRDX1Q06830 199 aaKnown RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 SHHQ15465 462 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 TGIF1Q15583 401 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 CEACAM16Q2WEN9 425 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 KLF17Q5JT82 389 aaPredicted RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 CLEC12AQ5QGZ9 265 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 TMEM205Q6UW68 189 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 FAM183BPQ6ZVS7 135 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 HIST2H3AQ71DI3 136 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 GRINAQ7Z429 371 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 OR8J3Q8NGG0 315 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 MFSD8Q8NHS3 518 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 MCFD2Q8NI22 146 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 CD200R1Q8TD46 325 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 RXFP2Q8WXD0 754 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 MARC2Q969Z3 335 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PITX2Q99697 317 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 SULT4A1Q9BR01 284 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 GINS3Q9BRX5 216 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 MROQ9BYG7 248 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 ZBP1Q9H171 429 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 RPF2Q9H7B2 306 aaKnown RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 RRAGDQ9NQL2 400 aaPredicted RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 OR12D3Q9UGF7 316 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 ZNF257Q9Y2Q1 563 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 CARHSP1Q9Y2V2 147 aaKnown RBP3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 V9GY05 133 aa3.43□□□□□ -1.86
PRPF40A-206ENST00000471167 PRDM2Q13029 1718 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CCNB3Q8WWL7 1395 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 EXOC1LA0A1B0GW35 172 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 TMEM150BA6NC51 233 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 OR4C46A6NHA9 309 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 J3QT63 122 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SAP18O00422 153 aaKnown RBP3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 MOSP00540 346 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CD79AP11912 226 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CYBAP13498 195 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 GABRA1P14867 456 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 PSMB1P20618 241 aaKnown RBP3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 MYL9P24844 172 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CD34P28906 385 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 MYCNOSP40205 109 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 OR1E2P47887 323 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 GZMMP51124 257 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SURF2Q15527 256 aaPredicted RBP3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SMIM21Q3B7S5 101 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CDNFQ49AH0 187 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 PAGE3Q5JUK9 113 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 LAMTOR1Q6IAA8 161 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 C4orf22Q6V702 233 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SPNS3Q6ZMD2 512 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CALHM3Q86XJ0 350 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC35F6Q8N357 371 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CADM2Q8N3J6 435 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CHST4Q8NCG5 386 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 ST6GALNAC3Q8NDV1 305 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 OR2M7Q8NG81 312 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 OR4P4Q8NGL7 312 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 LHFPL5Q8TAF8 219 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 NEIL3Q8TAT5 605 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 ABHD3Q8WU67 409 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 TAMM41Q96BW9 452 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 DCUN1D1Q96GG9 259 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SMARCD1Q96GM5 515 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 RDH12Q96NR8 316 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 BIRC8Q96P09 236 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 KIR2DL4Q99706 377 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 C2orf88Q9BSF0 95 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 EMC6Q9BV81 110 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SRXN1Q9BYN0 137 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 DEFB126Q9BYW3 111 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 CCDC90BQ9GZT6 254 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 ABCG5Q9H222 651 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 WFDC1Q9HC57 220 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SPANXA1Q9NS26 97 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 TMEM100Q9NV29 134 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 IDI2-AS1Q9NZ38 188 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 SS18L2Q9UHA2 77 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 VAX2Q9UIW0 290 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 ANGPT4Q9Y264 503 aa3.42□□□□□ -1.86
PRPF40A-206ENST00000471167 MTCL1Q9Y4B5 1905 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 IGKV1D-13A0A0B4J2D9 117 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 A0A0U1RQV1 116 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms