RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GLI4P10075 376 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 FHITP49789 147 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 AKR1D1P51857 326 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 ZNF616Q08AN1 781 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 FOXO1Q12778 655 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 GNMTQ14749 295 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 PDCD1Q15116 288 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 SP5Q6BEB4 398 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-209ENST00000470026 OR2C3Q8N628 320 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 LFNGQ8NES3 379 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 EXTL1Q92935 676 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 C12orf57Q99622 126 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 SMDT1Q9H4I9 107 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
BRCA1-209ENST00000470026 DUXBA0A1W2PPF3 345 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 C7orf77A4D0Y5 90 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 PINLYPA6NC86 204 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 SS18L1O75177 396 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-209ENST00000470026 PTAFRP25105 342 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 FGF12P61328 243 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 AWAT1Q58HT5 328 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 ACER2Q5QJU3 275 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 DPPA2Q7Z7J5 298 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 C14orf79Q96F83 325 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 SLC7A10Q9NS82 523 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 TCFL5Q9UL49 500 aa11.74□□□□□ -0.53
BRCA1-209ENST00000470026 PITX3O75364 302 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 C1QL1O75973 258 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 MT-ND4LP03901 98 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-209ENST00000470026 AGAP20933 346 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 RAB5BP61020 215 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
BRCA1-209ENST00000470026 NAXEQ8NCW5 288 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 ZNF845Q96IR2 970 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-209ENST00000470026 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
BRCA1-209ENST00000470026 IGSF23A1L1A6 192 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 LINC01387J3KSC0 135 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 SERPINA7P05543 415 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 COX5BP10606 129 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 MMP9P14780 707 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 MEOX2P50222 304 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 MPV17LQ2QL34 196 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 TBC1D26Q86UD7 250 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 ZFP82Q8N141 532 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 OR56B2PQ8NGI1 322 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 PSMF1Q92530 271 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 PBDC1Q9BVG4 233 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 SLC35B3Q9H1N7 401 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 RPS10P5Q9NQ39 176 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 C5orf52A6NGY3 159 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 TRAPPC6AO75865 159 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 BCL3P20749 454 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 UCP1P25874 307 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 MAS1LP35410 378 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 NOVA1P51513 510 aaKnown RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 ZNF266Q14584 549 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 SSPNQ14714 243 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 HERPUD1Q15011 391 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 RHEBQ15382 184 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 NMSQ5H8A3 153 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 MEX3BQ6ZN04 569 aaKnown RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 UBALD2Q8IYN6 164 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 HSD17B11Q8NBQ5 300 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 LILRB1Q8NHL6 650 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 GTF3AQ92664 365 aaKnown RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
BRCA1-209ENST00000470026 LYRM2Q9NU23 88 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-209ENST00000470026 PATE3B3GLJ2 98 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 CER1O95813 267 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 TK1P04183 234 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 ZNF44P15621 663 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 GDF1P27539 372 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 OTX2P32243 289 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 CYB561P49447 251 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 S100A12P80511 92 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 ID3Q02535 119 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 PRDX4Q13162 271 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 TMEM252Q8N6L7 170 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 MALSU1Q96EH3 234 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms