RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TAF9Q16594 264 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 TMEM241Q24JQ0 296 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 AMMECR1LQ6DCA0 310 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 AHSA2Q719I0 299 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 ADM2Q7Z4H4 148 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 DPPA2Q7Z7J5 298 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 LRRC6Q86X45 466 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 BPIFB6Q8NFQ5 453 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 OR2M3Q8NG83 312 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 CMTM2Q8TAZ6 248 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 OR52A5Q9H2C5 316 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 ASF1BQ9NVP2 202 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 MRM2Q9UI43 246 aaKnown RBP2.53□□□□□ -2
GAPVD1-211ENST00000467707 R4GN34 69 aa2.53□□□□□ -2
GAPVD1-211ENST00000467707 GPR179Q6PRD1 2367 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 KIAA1671Q9BY89 1806 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 IGKV1OR2-108A0A075B7D4 117 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 GOLGA8QA0A0J9YX86 632 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 PDCD6O75340 191 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 GTF2F2P13984 249 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 HRES1P13985 223 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 COL8A2P25067 703 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 CD34P28906 385 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 TSPOP30536 169 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 MAGEA3P43357 314 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 KLF3P57682 345 aaPredicted RBP2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 C1QTNF8P60827 252 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 UBE2KP61086 200 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 OR4D1Q15615 310 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 ZNF660Q6AZW8 331 aaPredicted RBP2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 ZNF470Q6ECI4 717 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 C10orf107Q8IVU9 208 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 SLC25A45Q8N413 288 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 C17orf78Q8N4C9 275 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 ZNF738Q8NE65 137 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 OR2K2Q8NGT1 345 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 OR2AE1Q8NHA4 323 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 RORBQ92753 470 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 TMIGD2Q96BF3 282 aa2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 BAZ2AQ9UIF9 1905 aaKnown RBP2.52□□□□□ -2.01
GAPVD1-211ENST00000467707 IGHV2-26A0A0B4J1V2 119 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 ISLRO14498 428 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 NEMFO60524 1076 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 CA2P00918 260 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 NQO2P16083 231 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 M6PRP20645 277 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 UGT2B10P36537 528 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 CBX5P45973 191 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 DEFB134Q4QY38 66 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 FAM162BQ5T6X4 162 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 FAM183BPQ6ZVS7 135 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 ZFP82Q8N141 532 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 TCAIMQ8N3R3 496 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 FAM45AQ8TCE6 357 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 DTD1Q8TEA8 209 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 CYTH2Q99418 400 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 ZNF391Q9UJN7 358 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 FADS3Q9Y5Q0 445 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 ICOSQ9Y6W8 199 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 SCN4AP35499 1836 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 SPATA31E1Q6ZUB1 1445 aa2.51□□□□□ -2.01
GAPVD1-211ENST00000467707 TICRRQ7Z2Z1 1910 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 HSBP1L1C9JCN9 74 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 H3BP45 60 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 M0QXV9 152 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 SLC31A1O15431 190 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 POP7O75817 140 aaKnown RBP2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 P0C880 135 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 FOXA1P55317 472 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 RAB25P57735 213 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 PRDX1Q06830 199 aaKnown RBP2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 FLOT2Q14254 428 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 LGALSLQ3ZCW2 172 aaPredicted RBP2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 PDZD11Q5EBL8 140 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 NXNL2Q5VZ03 156 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 DGAT2L6Q6ZPD8 337 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 LYZL2Q7Z4W2 148 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 ACTL9Q8TC94 416 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 CLDN23Q96B33 292 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 OTUB2Q96DC9 234 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 SERPINB11Q96P15 392 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 MFSD1Q9H3U5 465 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 DSN1Q9H410 356 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 SNX24Q9Y343 169 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 TRIP11Q15643 1979 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 C2orf16Q68DN1 1984 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 SSH2Q76I76 1423 aa2.5□□□□□ -2.01
GAPVD1-211ENST00000467707 SETD1AO15047 1707 aaKnown RBP2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 IGHV1-45A0A0A0MS14 117 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 TRAV8-2A0A0B4J237 113 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 A0A1B0GTI1 187 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 FAM183AA6NL82 134 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 ZNF729A6NN14 1252 aaPredicted RBP2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 SYNGR2O43760 224 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 PDYNP01213 254 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 PRPS1L1P21108 318 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 PYCR1P32322 319 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 ZNF141Q15928 474 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
GAPVD1-211ENST00000467707 SSX7Q7RTT5 188 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms