RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 GSTT2P0CG29 244 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 OR5H8P0DN80 308 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 CFHR2P36980 270 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 MDH2P40926 338 aaKnown RBP8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 NKX2-5P52952 324 aaPredicted RBP8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 SRSF4Q08170 494 aaKnown RBP8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 FBXL19-AS1Q494R0 122 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 TMEM128Q5BJH2 165 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 SPIN3Q5JUX0 258 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 LPCAT3Q6P1A2 487 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 ZNF880Q6PDB4 577 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 FIP1L1Q6UN15 594 aaKnown RBP8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 TMEM108Q6UXF1 575 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 NLRC3Q7RTR2 1065 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 GAPTQ8N292 157 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 SUMF2Q8NBJ7 301 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 OR52B4Q8NGK2 314 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 OR10Z1Q8NGY1 313 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 MARCH1Q8TCQ1 289 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 MITD1Q8WV92 249 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 TMEM171Q8WVE6 324 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 CAPSLQ8WWF8 208 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 ZNF488Q96MN9 340 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 C5orf66Q9H5L9 145 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 SEBOXQ9HB31 216 aaPredicted RBP8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 Q9N2K0 584 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 SHPKQ9UHJ6 478 aa8.08□□□□□ -1.12
APOBEC1-202ENST00000467171 DCHS1Q96JQ0 3298 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 TLN1Q9Y490 2541 aaKnown RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 MGAQ8IWI9 3026 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 TRGV8A0A0C4DH27 118 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 KIR2DS1A0A191URI9 304 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 OR5H14A6NHG9 310 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 H0YL77 283 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 DEGS1O15121 323 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 RGS11O94810 467 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 DUS4LO95620 317 aaKnown RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 HLA-AP01891 365 aaKnown RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 CTSDP07339 412 aaPredicted RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 LMO1P25800 156 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 KIR2DS4P43632 304 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 NPY4RP50391 375 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 UCP3P55916 312 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 KLF3P57682 345 aaPredicted RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 SELENOVP59797 346 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 GTF3C1Q12789 2109 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 PPP1R1AQ13522 171 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 KIR2DS1Q14954 304 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 PDCD1Q15116 288 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 C22orf34Q6ZV56 151 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 MAFIPQ8WZ33 124 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 RTBDNQ9BSG5 229 aaPredicted RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 DPCDQ9BVM2 203 aaPredicted RBP8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 CA10Q9NS85 328 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 RASL12Q9NYN1 266 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 IL36RNQ9UBH0 155 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 SPTA1P02549 2419 aa8.07□□□□□ -1.12
APOBEC1-202ENST00000467171 NCOR2Q9Y618 2525 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 SVILO95425 2214 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 INTS1Q8N201 2190 aaKnown RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 FAM172BPA6NC97 362 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 TRDCB7Z8K6 153 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 ATP6V1G2-DDX39BF2Z307 99 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 F5H5P2 479 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 G3V3Q6 166 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 IFNL4K9M1U5 179 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 SDCBPO00560 298 aaPredicted RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 SH2D1BO14796 132 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 NXPH2O95156 264 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 SFT2D2O95562 160 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 KNG1P01042 644 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 THBDP07204 575 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 GRPP07492 148 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 CD34P28906 385 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 GLP1RP43220 463 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 KCNJ3P48549 501 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 ASCL1P50553 236 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 SEC61A1P61619 476 aaKnown RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 IL13RA1P78552 427 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 SLC22A25Q6T423 547 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 WDR82Q6UXN9 313 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 Q6ZPA2 131 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 C17orf107Q6ZR85 190 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 NCCRP1Q6ZVX7 275 aaPredicted RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 MOB1BQ7L9L4 216 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 FAM90A1Q86YD7 464 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 ADAD2Q8NCV1 583 aaKnown RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 OR2T35Q8NGX2 323 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 MRPL30Q8TCC3 161 aaKnown RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 DYRK2Q92630 601 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 MRPL24Q96A35 216 aaKnown RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 TMEM230Q96A57 120 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 PHB2Q99623 299 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 ZNF2Q9BSG1 426 aaPredicted RBP8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 WDR13Q9H1Z4 485 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 MSL2Q9HCI7 577 aa8.06□□□□□ -1.12
APOBEC1-202ENST00000467171 CHMP1AQ9HD42 196 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms