RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZFP62Q8NB50 900 aaPredicted RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR6K3Q8NGY3 331 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 SCGB1C1Q8TD33 95 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 CASTOR1Q8WTX7 329 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZMYND19Q96E35 227 aaPredicted RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 PAIP2Q9BPZ3 127 aaKnown RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 ANGPTL4Q9BY76 406 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 VSIRQ9H7M9 311 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 TRIM45Q9H8W5 580 aaPredicted RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 MRM2Q9UI43 246 aaKnown RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 SCML1Q9UN30 329 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 TRAPPC1Q9Y5R8 145 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 LOXHD1Q8IVV2 1947 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 BAZ1BQ9UIG0 1483 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 GOLGA8QA0A0J9YX86 632 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 CDIPTO14735 213 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 SOD3P08294 240 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 INAFM2P0DMQ5 153 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 PSMB6P28072 239 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 CRATP43155 626 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 ACOT2P49753 483 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF235Q14590 738 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZBTB6Q15916 424 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 LAMTOR1Q6IAA8 161 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 GALNT10Q86SR1 603 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 C17orf78Q8N4C9 275 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 C3orf22Q8N5N4 141 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF565Q8N9K5 539 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR7G1Q8NGA0 311 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 DDI1Q8WTU0 396 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 CCDC12Q8WUD4 166 aaPredicted RBP2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 CCL17Q92583 94 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 FMC1Q96HJ9 113 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 FAM210AQ96ND0 272 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 OLFM3Q96PB7 478 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 SUCNR1Q9BXA5 334 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 ATP6V1DQ9Y5K8 247 aa2.27□□□□□ -2.05
CDC42BPA-211ENST00000466538 VGLL3A8MV65 326 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 I3L4J1 428 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 SHOX2O60902 331 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 HLA-AP01891 365 aaKnown RBP2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 CNTFRP26992 372 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 HOXA6P31267 233 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 LGALS7P47929 136 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR2B6P58173 313 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 GOLGA7BQ2TAP0 167 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 CEACAM21Q3KPI0 293 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 ACTBL2Q562R1 376 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF773Q6PK81 442 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 FAM183BPQ6ZVS7 135 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 TMEM144Q7Z5S9 345 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 AMN1Q8IY45 258 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 SERPINB11Q96P15 392 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 APOL4Q9BPW4 351 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 ANAPC13Q9BS18 74 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 SHANK2-AS3Q9BTD1 123 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 POTEKPQ9BYX7 375 aa2.26□□□□□ -2.05
CDC42BPA-211ENST00000466538 SSH2Q76I76 1423 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 IGHV3-43A0A0B4J1X8 118 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 IGKV2-24A0A0C4DH68 120 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 A0A1W2PRG6 482 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 TRPC5OSA6NMA1 111 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 LEUTXA8MZ59 168 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 C4orf51C9J302 202 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 MKRN2OSH3BPM6 223 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 K7ERS5 55 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 SGCEO43556 437 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 UBE2KP61086 200 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 HBG1P69891 147 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 HBG2P69892 147 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 PRKCDQ05655 676 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR4D1Q15615 310 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 USP50Q70EL3 339 aaPredicted RBP2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 AHSA2Q719I0 299 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 PAGE2Q7Z2X7 111 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 TMEM25Q86YD3 366 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 CPNE9Q8IYJ1 553 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR4C13Q8NGP0 309 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR8S1Q8NH09 359 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR2AE1Q8NHA4 323 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 RORBQ92753 470 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 RBPMSQ93062 196 aaKnown RBP2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR2V2Q96R30 315 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 HBEGFQ99075 208 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 SLC25A31Q9H0C2 315 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 POMKQ9H5K3 350 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 RHOFQ9HBH0 211 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 RBM12B-AS1Q9P1G2 102 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF492Q9P255 531 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 FADS3Q9Y5Q0 445 aa2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF706Q9Y5V0 76 aaPredicted RBP2.25□□□□□ -2.05
CDC42BPA-211ENST00000466538 KIAA0232Q92628 1395 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZBED9Q6R2W3 1325 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 TRAV8-3A0A0A6YYJ7 113 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 IGHV3-21A0A0B4J1V1 117 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 IGHV2-26A0A0B4J1V2 119 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 A0A1B0GTI1 187 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF233A6NK53 670 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 FAM183AA6NL82 134 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 H3BQ85 93 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms