RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZP1P60852 638 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 IL18R1Q13478 541 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 RBM39Q14498 530 aaKnown RBP16.36■□□□□ 0.21
COL6A1-203ENST00000466285 CENPVQ7Z7K6 275 aaPredicted RBP16.36■□□□□ 0.21
COL6A1-203ENST00000466285 CCDC54Q8NEL0 328 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 CORO2AQ92828 525 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 RBMXL1Q96E39 390 aaKnown RBP16.36■□□□□ 0.21
COL6A1-203ENST00000466285 RNFT2Q96EX2 444 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 PELI1Q96FA3 418 aa16.36■□□□□ 0.21
COL6A1-203ENST00000466285 TSSC4Q9Y5U2 329 aaPredicted RBP16.36■□□□□ 0.21
COL6A1-203ENST00000466285 BUB1B-PAK6H3BSN5 160 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 EBAG9O00559 213 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 SLC16A6O15403 523 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 ALDOBP05062 364 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 ISG15P05161 165 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 PRKACBP22694 351 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 LMO1P25800 156 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 PTGFRP43088 359 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 C9orf152Q5JTZ5 239 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 TMEM244Q5VVB8 128 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 LPCAT4Q643R3 524 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 FDX2Q6P4F2 183 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 ZBTB49Q6ZSB9 765 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 C16orf82Q7Z2V1 217 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 LINC00482Q8N8I6 264 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 OR13C3Q8NGS6 347 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 SPSB1Q96BD6 273 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 KIRREL1Q96J84 757 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 GAL3ST2Q9H3Q3 398 aa16.35■□□□□ 0.21
COL6A1-203ENST00000466285 E9PQ18 207 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 SH2D1BO14796 132 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 CYB5AP00167 134 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 CDC42P60953 191 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 KRBOX4Q5JUW0 171 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 C1orf146Q5VVC0 180 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 ZNF329Q86UD4 541 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 OR13A1Q8NGR1 328 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 ZNF596Q8TC21 504 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 C4orf36Q96KX1 117 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 NOL4LQ96MY1 436 aaPredicted RBP16.34■□□□□ 0.21
COL6A1-203ENST00000466285 ISG20L2Q9H9L3 353 aaKnown RBP16.34■□□□□ 0.21
COL6A1-203ENST00000466285 NEK6Q9HC98 313 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 TAS2R3Q9NYW6 316 aa16.34■□□□□ 0.21
COL6A1-203ENST00000466285 A0A087X0M5 115 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 TRAV39A0A0B4J263 110 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 A0A1B0GX30 115 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 A0A1W2PPI3 338 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 LEUTXA8MZ59 168 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 E9PI62 339 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 HTR1AP08908 422 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 CGB3P0DN86 165 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 CGB7P0DN87 165 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 NFYBP25208 207 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 ZSCAN26Q16670 478 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 RTN4RL2Q86UN3 420 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 OR56B4Q8NH76 319 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 PLPPR1Q8TBJ4 325 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 STMN2Q93045 179 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 ENOPH1Q9UHY7 261 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 MYRFQ9Y2G1 1151 aa16.33■□□□□ 0.2
COL6A1-203ENST00000466285 DAPL1A0PJW8 107 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 J3QLW9 94 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 CSN2P05814 226 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 SNRNP70P08621 437 aaKnown RBP16.32■□□□□ 0.2
COL6A1-203ENST00000466285 ZNF19P17023 458 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 BRS3P32247 399 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 GLP1RP43220 463 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 SLC35A2P78381 396 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 TMED1Q13445 227 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 ZIK1Q3SY52 487 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-203ENST00000466285 OR4X2Q8NGF9 303 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 CAPSLQ8WWF8 208 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 LGALS12Q96DT0 336 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 KIF25Q9UIL4 384 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 LINC00527Q9UJ94 153 aa16.32■□□□□ 0.2
COL6A1-203ENST00000466285 TRAV24A0A0B4J272 114 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 EI24O14681 340 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 MT-ND2P03891 347 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 ALPLP05186 524 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 RASSF2P50749 326 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 ALKBH1Q13686 389 aaKnown RBP16.31■□□□□ 0.2
COL6A1-203ENST00000466285 KPNB1Q14974 876 aaKnown RBP16.31■□□□□ 0.2
COL6A1-203ENST00000466285 LTC4SQ16873 150 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 OR52W1Q6IF63 320 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 FAM53AQ6NSI3 398 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-203ENST00000466285 MRPL41Q8IXM3 137 aaKnown RBP16.31■□□□□ 0.2
COL6A1-203ENST00000466285 OSR2Q8N2R0 312 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 OR51A2Q8NGJ7 313 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 OR10K1Q8NGX5 313 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 PYDC1Q8WXC3 89 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 RGP1Q92546 391 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-203ENST00000466285 RFKQ969G6 155 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 CENPNQ96H22 339 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-203ENST00000466285 ZNF649Q9BS31 505 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 CALYQ9NYX4 217 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 GLS2Q9UI32 602 aa16.31■□□□□ 0.2
COL6A1-203ENST00000466285 A0A1W2PPE3 182 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A18PA6NE21 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A16PA6NEW6 464 aa16.3■□□□□ 0.2
COL6A1-203ENST00000466285 FAM90A20PA6NIJ5 464 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms