RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	TMPRSS2	O15393	492 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	FSTL3	O95633	263 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	GSTP1	P09211	210 aa	Known RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L2	P0CJ85	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L3	P0CJ86	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L4	P0CJ87	422 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L5	P0CJ88	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L6	P0CJ89	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L7	P0CJ90	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	LMO1	P25800	156 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	PTBP1	P26599	531 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	PDLIM4	P50479	330 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF846	Q147U1	533 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	ARL6IP1	Q15041	203 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF788	Q6ZQV5	615 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	MUC20	Q8N307	709 aa	Predicted RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF561	Q8N587	486 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNRF1	Q8ND25	227 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DYRK2	Q92630	601 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	SDSL	Q96GA7	329 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	GAFA1	Q96PS6	74 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	WDR12	Q9GZL7	423 aa	Known RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	CHST6	Q9GZX3	395 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	SEBOX	Q9HB31	216 aa	Predicted RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	BEX4	Q9NWD9	120 aa	Predicted RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	DUX4	Q9UBX2	424 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	RABL2B	Q9UNT1	228 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	MAB21L2	Q9Y586	359 aa		11.18	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM82	A0PJX8	343 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SERPINE3	A8MV23	424 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	NDUFA2	O43678	99 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	TPPP	O94811	219 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ARFRP1	Q13795	201 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	RBM39	Q14498	530 aa	Known RBP	11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	DEFB113	Q30KQ7	82 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	RNASE12	Q5GAN4	147 aa	Known RBP	11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	HACD4	Q5VWC8	232 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	LYPD2	Q6UXB3	125 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	C17orf107	Q6ZR85	190 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	DCDC5	Q6ZRR9	648 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	FAM216B	Q8N7L0	139 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	C15orf40	Q8WUR7	153 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ST8SIA4	Q92187	359 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	LURAP1	Q96LR2	239 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	DNTTIP1	Q9H147	329 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	AK3	Q9UIJ7	227 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SPG11	Q96JI7	2443 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	APC	P25054	2843 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	MEIOC	A2RUB1	952 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	TNFRSF13B	O14836	293 aa	Predicted RBP	11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SIGLEC5	O15389	551 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ADAM20	O43506	726 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ZNF737	O75373	536 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	GLA	P06280	429 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	MELTF	P08582	738 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SELL	P14151	372 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	GIF	P27352	417 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	PRSS3	P35030	304 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	OR3A1	P47881	315 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	GNG2	P59768	71 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	IL13RA1	P78552	427 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	GUCA2A	Q02747	115 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	PNLIPRP3	Q17RR3	467 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	CLEC2A	Q6UVW9	174 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SLC36A1	Q7Z2H8	476 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM185A	Q8NFB2	350 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	OR4S1	Q8NGB4	309 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	NUDCD2	Q8WVJ2	157 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	FAM168A	Q92567	244 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	MED30	Q96HR3	178 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SNX22	Q96L94	193 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	BPESC1	Q9GZL8	116 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SRR	Q9GZT4	340 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	SHARPIN	Q9H0F6	387 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	NARFL	Q9H6Q4	476 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ING3	Q9NXR8	418 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	ETAA1	Q9NY74	926 aa		11.17	□□□□□ -0.62
ATF3-208	ENST00000465155	CEACAM18	A8MTB9	384 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155		J3QRK9	145 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155		K7N7A8	449 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	CTDSPL	O15194	276 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	TK1	P04183	234 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	CD3G	P09693	182 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	CSF3	P09919	207 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	MRPS15	P82914	257 aa	Known RBP	11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	DGCR2	P98153	550 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	GRK1	Q15835	563 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	TMEM155	Q4W5P6	130 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155		Q8N402	240 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	PPP1R35	Q8TAP8	253 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	NINJ1	Q92982	152 aa		11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	SDHC	Q99643	169 aa	Predicted RBP	11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	CMSS1	Q9BQ75	279 aa	Known RBP	11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.16	□□□□□ -0.62
ATF3-208	ENST00000465155	ARID1A	O14497	2285 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms