RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 HAVCR2Q8TDQ0 301 aa7.15□□□□□ -1.26
APP-213ENST00000464867 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
APP-213ENST00000464867 ALX4Q9H161 411 aaPredicted RBP7.15□□□□□ -1.26
APP-213ENST00000464867 PLEKHA3Q9HB20 300 aa7.15□□□□□ -1.26
APP-213ENST00000464867 KRT84Q9NSB2 600 aa7.15□□□□□ -1.26
APP-213ENST00000464867 MRM2Q9UI43 246 aaKnown RBP7.15□□□□□ -1.26
APP-213ENST00000464867 SNX13Q9Y5W8 968 aa7.15□□□□□ -1.26
APP-213ENST00000464867 IGHV4OR15-8A0A075B7B6 117 aa7.14□□□□□ -1.27
APP-213ENST00000464867 A0A087WW49 117 aa7.14□□□□□ -1.27
APP-213ENST00000464867 A0A087X0M5 115 aa7.14□□□□□ -1.27
APP-213ENST00000464867 A0A1B0GX30 115 aa7.14□□□□□ -1.27
APP-213ENST00000464867 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
APP-213ENST00000464867 RGS11O94810 467 aa7.14□□□□□ -1.27
APP-213ENST00000464867 NRASP01111 189 aa7.14□□□□□ -1.27
APP-213ENST00000464867 HSPB1P04792 205 aaKnown RBP7.14□□□□□ -1.27
APP-213ENST00000464867 LGALS1P09382 135 aaKnown RBP7.14□□□□□ -1.27
APP-213ENST00000464867 PSKH1P11801 424 aa7.14□□□□□ -1.27
APP-213ENST00000464867 H2AFXP16104 143 aaPredicted RBP7.14□□□□□ -1.27
APP-213ENST00000464867 ERP29P30040 261 aaKnown RBP7.14□□□□□ -1.27
APP-213ENST00000464867 KDELR2P33947 212 aa7.14□□□□□ -1.27
APP-213ENST00000464867 PTGFRP43088 359 aa7.14□□□□□ -1.27
APP-213ENST00000464867 OMPP47874 163 aa7.14□□□□□ -1.27
APP-213ENST00000464867 GZMMP51124 257 aa7.14□□□□□ -1.27
APP-213ENST00000464867 BLVRAP53004 296 aa7.14□□□□□ -1.27
APP-213ENST00000464867 GYS2P54840 703 aa7.14□□□□□ -1.27
APP-213ENST00000464867 CYLC2Q14093 348 aaPredicted RBP7.14□□□□□ -1.27
APP-213ENST00000464867 KRT71Q3SY84 523 aa7.14□□□□□ -1.27
APP-213ENST00000464867 EPGNQ6UW88 154 aa7.14□□□□□ -1.27
APP-213ENST00000464867 ENTHD1Q8IYW4 607 aa7.14□□□□□ -1.27
APP-213ENST00000464867 MAPKAPK5-AS1Q8N8E1 139 aa7.14□□□□□ -1.27
APP-213ENST00000464867 OR52L1Q8NGH7 329 aa7.14□□□□□ -1.27
APP-213ENST00000464867 RNF133Q8WVZ7 376 aa7.14□□□□□ -1.27
APP-213ENST00000464867 TSEN15Q8WW01 171 aaKnown RBP7.14□□□□□ -1.27
APP-213ENST00000464867 TMEM106AQ96A25 262 aa7.14□□□□□ -1.27
APP-213ENST00000464867 TOLLIPQ9H0E2 274 aa7.14□□□□□ -1.27
APP-213ENST00000464867 OR52D1Q9H346 318 aa7.14□□□□□ -1.27
APP-213ENST00000464867 DCAF13Q9NV06 445 aaKnown RBP7.14□□□□□ -1.27
APP-213ENST00000464867 OR6C3Q9NZP0 311 aa7.14□□□□□ -1.27
APP-213ENST00000464867 J3QR06 171 aa7.13□□□□□ -1.27
APP-213ENST00000464867 RGS16O15492 202 aaPredicted RBP7.13□□□□□ -1.27
APP-213ENST00000464867 HAND1O96004 215 aa7.13□□□□□ -1.27
APP-213ENST00000464867 H1F0P07305 194 aaKnown RBP7.13□□□□□ -1.27
APP-213ENST00000464867 ATP6V1B1P15313 513 aa7.13□□□□□ -1.27
APP-213ENST00000464867 GLIPR1P48060 266 aa7.13□□□□□ -1.27
APP-213ENST00000464867 CD81P60033 236 aa7.13□□□□□ -1.27
APP-213ENST00000464867 EBI3Q14213 229 aa7.13□□□□□ -1.27
APP-213ENST00000464867 GALEQ14376 348 aa7.13□□□□□ -1.27
APP-213ENST00000464867 FKBP9P1Q75LS8 142 aa7.13□□□□□ -1.27
APP-213ENST00000464867 ASRGL1Q7L266 308 aa7.13□□□□□ -1.27
APP-213ENST00000464867 KRT74Q7RTS7 529 aa7.13□□□□□ -1.27
APP-213ENST00000464867 TMEM217Q8N7C4 229 aa7.13□□□□□ -1.27
APP-213ENST00000464867 OR8H1Q8NGG4 311 aa7.13□□□□□ -1.27
APP-213ENST00000464867 OR6K6Q8NGW6 343 aa7.13□□□□□ -1.27
APP-213ENST00000464867 OR10X1Q8NGY0 326 aa7.13□□□□□ -1.27
APP-213ENST00000464867 RP9Q8TA86 221 aaKnown RBP7.13□□□□□ -1.27
APP-213ENST00000464867 CORO2AQ92828 525 aa7.13□□□□□ -1.27
APP-213ENST00000464867 RNF183Q96D59 192 aa7.13□□□□□ -1.27
APP-213ENST00000464867 S1PR3Q99500 378 aa7.13□□□□□ -1.27
APP-213ENST00000464867 HSPB9Q9BQS6 159 aa7.13□□□□□ -1.27
APP-213ENST00000464867 ABHD6Q9BV23 337 aa7.13□□□□□ -1.27
APP-213ENST00000464867 SLC25A19Q9HC21 320 aa7.13□□□□□ -1.27
APP-213ENST00000464867 SLC2A8Q9NY64 477 aa7.13□□□□□ -1.27
APP-213ENST00000464867 ZNF107Q9UII5 783 aaPredicted RBP7.13□□□□□ -1.27
APP-213ENST00000464867 FAM32AQ9Y421 112 aaKnown RBP7.13□□□□□ -1.27
APP-213ENST00000464867 A0A0J9YWU9 116 aa7.12□□□□□ -1.27
APP-213ENST00000464867 A0A1W2PRQ8 180 aa7.12□□□□□ -1.27
APP-213ENST00000464867 XRCC3O43542 346 aa7.12□□□□□ -1.27
APP-213ENST00000464867 ZNF682O95780 498 aa7.12□□□□□ -1.27
APP-213ENST00000464867 GAPDHP04406 335 aaKnown RBP7.12□□□□□ -1.27
APP-213ENST00000464867 MPZP25189 248 aa7.12□□□□□ -1.27
APP-213ENST00000464867 PPIFP30405 207 aaKnown RBP7.12□□□□□ -1.27
APP-213ENST00000464867 OPRL1P41146 370 aa7.12□□□□□ -1.27
APP-213ENST00000464867 ERVK11-1P61568 191 aa7.12□□□□□ -1.27
APP-213ENST00000464867 BNIP1Q12981 228 aa7.12□□□□□ -1.27
APP-213ENST00000464867 IL24Q13007 206 aa7.12□□□□□ -1.27
APP-213ENST00000464867 DGCR6Q14129 220 aa7.12□□□□□ -1.27
APP-213ENST00000464867 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
APP-213ENST00000464867 IFI44LQ53G44 452 aa7.12□□□□□ -1.27
APP-213ENST00000464867 VTCN1Q7Z7D3 282 aa7.12□□□□□ -1.27
APP-213ENST00000464867 IZUMO1Q8IYV9 350 aa7.12□□□□□ -1.27
APP-213ENST00000464867 C17orf53Q8N3J3 647 aaPredicted RBP7.12□□□□□ -1.27
APP-213ENST00000464867 Q8N402 240 aa7.12□□□□□ -1.27
APP-213ENST00000464867 OR8B12Q8NGG6 310 aa7.12□□□□□ -1.27
APP-213ENST00000464867 OR52N4Q8NGI2 321 aa7.12□□□□□ -1.27
APP-213ENST00000464867 PHLDA1Q8WV24 401 aaPredicted RBP7.12□□□□□ -1.27
APP-213ENST00000464867 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.12□□□□□ -1.27
APP-213ENST00000464867 CEP19Q96LK0 163 aa7.12□□□□□ -1.27
APP-213ENST00000464867 PKIBQ9C010 78 aa7.12□□□□□ -1.27
APP-213ENST00000464867 ETAA1Q9NY74 926 aa7.12□□□□□ -1.27
APP-213ENST00000464867 ERGIC3Q9Y282 383 aa7.12□□□□□ -1.27
APP-213ENST00000464867 PIGLQ9Y2B2 252 aa7.12□□□□□ -1.27
APP-213ENST00000464867 IGHV3-72A0A0B4J1Y9 119 aa7.11□□□□□ -1.27
APP-213ENST00000464867 TRAV41A0A0B4J266 112 aa7.11□□□□□ -1.27
APP-213ENST00000464867 TCRBV5S2A0A599 114 aa7.11□□□□□ -1.27
APP-213ENST00000464867 PQLC2LA1A4F0 135 aa7.11□□□□□ -1.27
APP-213ENST00000464867 G3V318 75 aa7.11□□□□□ -1.27
APP-213ENST00000464867 DLGAP1O14490 977 aa7.11□□□□□ -1.27
APP-213ENST00000464867 HSD17B6O14756 317 aa7.11□□□□□ -1.27
APP-213ENST00000464867 PRODHO43272 600 aa7.11□□□□□ -1.27
APP-213ENST00000464867 MOSP00540 346 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms