RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MARCH1Q8TCQ1 289 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 SLC25A32Q9H2D1 315 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 FN3KRPQ9HA64 309 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 MTCH1Q9NZJ7 389 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 AMDHD2Q9Y303 409 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 A0A0G2JNJ9 132 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 MED19A0JLT2 244 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-213ENST00000462730 OR5H1A6NKK0 313 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 MPTX1A8MV57 137 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 F8VVB4 439 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 F8VWA3 439 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 RLN2P04090 185 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 RAC2P15153 192 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 NPY4RP50391 375 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 FGF12P61328 243 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 RBPJQ06330 500 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 DHRS2Q13268 280 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 DAZAP2Q15038 168 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-213ENST00000462730 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 TMEM17Q86X19 198 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 C12orf45Q8N5I9 185 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-213ENST00000462730 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 MICU1Q9BPX6 476 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 Q9UFV3 132 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 KLF2Q9Y5W3 355 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-213ENST00000462730 EEF1E1-BLOC1S5C9J1V9 151 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 IGLV1-44P01699 117 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 FCGR3AP08637 254 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 SELEP16581 610 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 FUT3P21217 361 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 DTYMKP23919 212 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 OPRM1P35372 400 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 MPV17P39210 176 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 LY6G6FQ5SQ64 297 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
HDAC6-213ENST00000462730 POM121Q96HA1 1249 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 RTL8AQ9BWD3 113 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 PRORYQ9H606 182 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF442Q9H7R0 627 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 PRELID3BQ9Y3B1 194 aa12.36□□□□□ -0.43
HDAC6-213ENST00000462730 RP1L1Q8IWN7 2480 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-213ENST00000462730 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM221AA4D161 298 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A10PA6NDY2 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A18PA6NE21 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A16PA6NEW6 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A20PA6NIJ5 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A8PA6NJQ4 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A7PA6NKC0 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A22PA8MWA6 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A12PA8MX19 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A5PA8MXJ8 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A23PA8MXZ1 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 IQCF6A8MYZ5 107 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 HLA-AP01891 365 aaKnown RBP12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A15PP0C7V4 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A13PP0C7W8 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A14PP0C7W9 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 FAM90A24PP0C7X0 464 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 PSG7Q13046 419 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF488Q96MN9 340 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 ADAT1Q9BUB4 502 aaKnown RBP12.35□□□□□ -0.43
HDAC6-213ENST00000462730 PKIBQ9C010 78 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 OR51I2Q9H344 312 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 EDARQ9UNE0 448 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 NOP16Q9Y3C1 178 aaKnown RBP12.35□□□□□ -0.43
HDAC6-213ENST00000462730 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
HDAC6-213ENST00000462730 IGHV2OR16-5A0A0B4J2B6 119 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 J3QT63 122 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 AKR1C4P17516 323 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 ZBTB25P24278 435 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 CD34P28906 385 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 IL24Q13007 206 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 LYG2Q86SG7 212 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 CLRN3Q8NCR9 226 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 KLF14Q8TD94 323 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-213ENST00000462730 S100PBPQ96BU1 408 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 MARS2Q96GW9 593 aaKnown RBP12.34□□□□□ -0.43
HDAC6-213ENST00000462730 OSGIN2Q9Y236 505 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 A8MXE2 369 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 FPR2P25090 351 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 TAS2R31P59538 309 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 UBA52P62987 128 aaKnown RBP12.34□□□□□ -0.43
HDAC6-213ENST00000462730 UNQ6126/PRO20091Q6UXV3 157 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 ANXA10Q9UJ72 324 aa12.34□□□□□ -0.43
HDAC6-213ENST00000462730 C9orf170A2RU37 121 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 CD8AP01732 235 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 PMELP40967 661 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 OR8G1Q15617 311 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 TIMM23BQ5SRD1 257 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 FAHD2BQ6P2I3 314 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms