RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 MAP1AP78559 2803 aaPredicted RBP12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 ARID1AO14497 2285 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 ROS1P08922 2347 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 CADP27708 2225 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 MEIOCA2RUB1 952 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 ORC5O43913 435 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 GLAP06280 429 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 CSF1P09603 554 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 GDNFP39905 211 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 IFITM3Q01628 133 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 ZNF146Q15072 292 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 CLEC9AQ6UXN8 241 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 ST8SIA4Q92187 359 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 TRIM63Q969Q1 353 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 FAAP24Q9BTP7 215 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 IFT22Q9H7X7 185 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 FLNAP21333 2647 aaKnown RBP12.76□□□□□ -0.37
TMEM39A-203ENST00000461654 WNT9BO14905 357 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 LY6G6DO95868 133 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 HAND1O96004 215 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 RCVRNP35243 200 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 PDCD1Q15116 288 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 SPRNQ5BIV9 151 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 DNM1P46Q6ZS02 220 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 GCSAMQ8N6F7 178 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 NUDCD2Q8WVJ2 157 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 NEU4Q8WWR8 484 aaPredicted RBP12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 CMSS1Q9BQ75 279 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 WDR13Q9H1Z4 485 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 RCC2Q9P258 522 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 NLKQ9UBE8 527 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 IL36RNQ9UBH0 155 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 KLK11Q9UBX7 282 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 RBMX2Q9Y388 322 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 WIPI2Q9Y4P8 454 aa12.75□□□□□ -0.37
TMEM39A-203ENST00000461654 IGHV1-69-2A0A0G2JMI3 117 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 UBE2QL1A1L167 161 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 MEIS3P1A6NDR6 274 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 SIRPB1O00241 398 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 LANCL1O43813 399 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 LHBP01229 141 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 ASAH1Q13510 395 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 MICBQ29980 383 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 HFEQ30201 348 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 PAN3Q58A45 887 aaKnown RBP12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 DEDD2Q8WXF8 326 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 CCL17Q92583 94 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 C7orf50Q9BRJ6 194 aaKnown RBP12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 DPCDQ9BVM2 203 aaPredicted RBP12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 BARX1Q9HBU1 254 aaPredicted RBP12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 ZNF107Q9UII5 783 aaPredicted RBP12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 AK3Q9UIJ7 227 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 KCNK7Q9Y2U2 307 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 NF1P21359 2839 aa12.74□□□□□ -0.37
TMEM39A-203ENST00000461654 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 OR2H2O95918 312 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 PTTG1O95997 202 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 CYB5R3P00387 301 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 EGR1P18146 543 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 CD80P33681 288 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 MDH2P40926 338 aaKnown RBP12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 TAS2R19P59542 299 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 DYRK1AQ13627 763 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 CLEC12BQ2HXU8 276 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 TRIM16LQ309B1 348 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 OLFML2AQ68BL7 652 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 C11orf71Q6IPW1 123 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 Q6P435 159 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 BRICD5Q6PL45 260 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 MINDY2Q8NBR6 621 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 PPP1R35Q8TAP8 253 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 RDH5Q92781 318 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 OCSTAMPQ9BR26 566 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 CACNG6Q9BXT2 260 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 RIMS4Q9H426 269 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 SEBOXQ9HB31 216 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 C12orf4Q9NQ89 552 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 TMEM106BQ9NUM4 274 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 TREM2Q9NZC2 230 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 ELF5Q9UKW6 265 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 CACNG2Q9Y698 323 aa12.73□□□□□ -0.37
TMEM39A-203ENST00000461654 TRAV38-1A0A0B4J264 116 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 ANKRD20A5PA0PJZ0 165 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 NAP1L6A6NFF2 107 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 RFPL4AA6NLU0 287 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 ZNF736B4DX44 427 aaPredicted RBP12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 RFPL4AL1F8VTS6 287 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 HSPB6O14558 160 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 LYRM1O43325 122 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 SSX5O60225 188 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms