RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 DEFB108AA8MXU0 73 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 K7EQM0 130 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 TMEM65Q6PI78 240 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 TRAT1Q6PIZ9 186 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 CLEC9AQ6UXN8 241 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 RYDENQ9NUL5 291 aaKnown RBP12.94□□□□□ -0.34
PTPRU-205ENST00000460170 SPTA1P02549 2419 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 FCGR3BO75015 233 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 PGA4P0DJD7 388 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 BCL3P20749 454 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 Q3ZCU0 254 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 VAX1Q5SQQ9 334 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 TMPRSS7Q7RTY8 843 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 LPAR5Q9H1C0 372 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 LY86O95711 162 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 ADH4P08319 380 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 HNF1AP20823 631 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 C3AR1Q16581 482 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 TMEM104Q8NE00 496 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF519Q8TB69 540 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 GAPTQ8N292 157 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 KDF1Q8NAX2 398 aaPredicted RBP12.93□□□□□ -0.34
PTPRU-205ENST00000460170 LRRC29Q8WV35 223 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 NQO2P16083 231 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
PTPRU-205ENST00000460170 SSTP61278 116 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 TRIP6Q15654 476 aaKnown RBP12.93□□□□□ -0.34
PTPRU-205ENST00000460170 POM121L2Q96KW2 1035 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 MMP24Q9Y5R2 645 aa12.93□□□□□ -0.34
PTPRU-205ENST00000460170 SPINK2P20155 84 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 GNB1P62873 340 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 LYZL2Q7Z4W2 148 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 TMEM74BQ9NUR3 256 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 V9GYS6 101 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 SCN2AQ99250 2005 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 A0A1W2PP11 408 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 IGKV3-11P04433 115 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 MPGP29372 298 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 EGR4Q05215 589 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 FOXO1Q12778 655 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 FFAR4Q5NUL3 377 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 SLC25A47Q6Q0C1 308 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 DEFB124Q8NES8 71 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 OR5A2Q8NGI9 324 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 MRGPRDQ8TDS7 321 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
PTPRU-205ENST00000460170 TRIOBPQ9H2D6 2365 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 CDS2O95674 445 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 CELA2AP08217 269 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 OR2M7Q8NG81 312 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 LURAP1Q96LR2 239 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 CCL28Q9NRJ3 127 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 ANKRD36A6QL64 1941 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 FAM24BQ8N5W8 94 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 ANGPTL4Q9BY76 406 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 CXXC4Q9H2H0 198 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 DNAJC13O75165 2243 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 J3QT63 122 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 KLK10O43240 276 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 SYNGR2O43760 224 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 EFEMP2O95967 443 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 HRASP01112 189 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 SOX8P57073 446 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 TPPP3Q9BW30 176 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 PPP1R14DQ9NXH3 145 aa12.92□□□□□ -0.34
PTPRU-205ENST00000460170 GAR1Q9NY12 217 aaKnown RBP12.92□□□□□ -0.34
PTPRU-205ENST00000460170 B4E171 279 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 CHST1O43916 411 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 TSPAN7P41732 249 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 BPIFB3P59826 476 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 SIGLEC14Q08ET2 396 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 FDX2Q6P4F2 183 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 A0A1W2PR77 199 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 CLDN34H7C241 214 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 LMX1BO60663 402 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 DYNLT3P51808 116 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 DBX2Q6ZNG2 339 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 IGHV3-43A0A0B4J1X8 118 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 CDIPTO14735 213 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 IGHV3-43DP0DP04 118 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 DCAF10Q5QP82 559 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-205ENST00000460170 A0A1W2PNV4 684 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF320A2RRD8 509 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 G3V3Q6 166 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 DYRK2Q92630 601 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 VWCEQ96DN2 955 aa12.91□□□□□ -0.34
PTPRU-205ENST00000460170 BSCL2Q96G97 398 aaPredicted RBP12.91□□□□□ -0.34
PTPRU-205ENST00000460170 CHD5Q8TDI0 1954 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms