RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PRB1P04280 392 aa20.58■□□□□ 0.88
U2AF1-204ENST00000459639 MDH2P40926 338 aaKnown RBP20.58■□□□□ 0.88
U2AF1-204ENST00000459639 OR3A3P47888 321 aa20.58■□□□□ 0.88
U2AF1-204ENST00000459639 MECP2P51608 486 aaKnown RBP20.58■□□□□ 0.88
U2AF1-204ENST00000459639 TESK1Q15569 626 aa20.58■□□□□ 0.88
U2AF1-204ENST00000459639 SRSF7Q16629 238 aaKnown RBP eCLIP20.58■□□□□ 0.88
U2AF1-204ENST00000459639 ZNF672Q499Z4 452 aaPredicted RBP20.58■□□□□ 0.88
U2AF1-204ENST00000459639 FAM209AQ5JX71 171 aa20.58■□□□□ 0.88
U2AF1-204ENST00000459639 ZNF286AQ9HBT8 521 aa20.58■□□□□ 0.88
U2AF1-204ENST00000459639 CHMP1AQ9HD42 196 aaPredicted RBP20.58■□□□□ 0.88
U2AF1-204ENST00000459639 ETAA1Q9NY74 926 aa20.58■□□□□ 0.88
U2AF1-204ENST00000459639 CISD1Q9NZ45 108 aaKnown RBP20.58■□□□□ 0.88
U2AF1-204ENST00000459639 IGKV1D-8A0A087WSZ0 117 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 C7orf66A4D0T2 115 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 FAM221AA4D161 298 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 SIRPB1O00241 398 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 LMO1P25800 156 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 CARTPTQ16568 116 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 SCGB2B2Q4G0G5 96 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 PAN3Q58A45 887 aaKnown RBP20.57■□□□□ 0.88
U2AF1-204ENST00000459639 Q6ZS49 121 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 GCSAMQ8N6F7 178 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 LILRB1Q8NHL6 650 aaPredicted RBP20.57■□□□□ 0.88
U2AF1-204ENST00000459639 Q8TCH9 128 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 GCM1Q9NP62 436 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 TREM2Q9NZC2 230 aa20.57■□□□□ 0.88
U2AF1-204ENST00000459639 PRAF2O60831 178 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 LHBP01229 141 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 EGR1P18146 543 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 TNFRSF1AP19438 455 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 ARPC4P59998 168 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 CDK10Q15131 360 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 Q6ZPA2 131 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 ZNF843Q8N446 348 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 NEURL2Q9BR09 285 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 PPA2Q9H2U2 334 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 SEBOXQ9HB31 216 aaPredicted RBP20.56■□□□□ 0.88
U2AF1-204ENST00000459639 OR14J1Q9UGF5 321 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 NPTNQ9Y639 398 aa20.56■□□□□ 0.88
U2AF1-204ENST00000459639 TRBV6-6A0A0A6YYG2 114 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.55■□□□□ 0.88
U2AF1-204ENST00000459639 PYCARD-AS1I3L0S3 204 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 IFNL4K9M1U5 179 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 OVCH2Q7RTZ1 564 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 TMEM17Q86X19 198 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 OR13C8Q8NGS7 320 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 OR11L1Q8NGX0 322 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 GIMAP1Q8WWP7 306 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 PPP1R14BQ96C90 147 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 MS4A5Q9H3V2 200 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 DYNLRB1Q9NP97 96 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 EHFQ9NZC4 300 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 RNF7Q9UBF6 113 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 CFAP46Q8IYW2 2715 aa20.55■□□□□ 0.88
U2AF1-204ENST00000459639 POM121CA8CG34 1229 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 TRAPPC2P0DI81 140 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 TRAPPC2BP0DI82 140 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 MST1LQ2TV78 715 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 EGLN1Q9GZT9 426 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 Q9N2K0 584 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 CACNA1DQ01668 2161 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 H7C1Q1 480 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 HOXA4Q00056 320 aaPredicted RBP20.54■□□□□ 0.88
U2AF1-204ENST00000459639 GRK1Q15835 563 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 MRPL30Q8TCC3 161 aaKnown RBP20.54■□□□□ 0.88
U2AF1-204ENST00000459639 FAM222BQ8WU58 562 aa20.54■□□□□ 0.88
U2AF1-204ENST00000459639 DYSFO75923 2080 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 A0A0A6YYJ9 748 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 CEBPDP49716 269 aaPredicted RBP20.53■□□□□ 0.88
U2AF1-204ENST00000459639 TSPAN5P62079 268 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 CCL8P80075 99 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 GHITMQ9H3K2 345 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 TMEM165Q9HC07 324 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 NECAP2Q9NVZ3 263 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 DNAJB11Q9UBS4 358 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 PPP1R3CQ9UQK1 317 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 WIPI2Q9Y4P8 454 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 ADGRG4Q8IZF6 3080 aa20.53■□□□□ 0.88
U2AF1-204ENST00000459639 RFPL4AA6NLU0 287 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 RFPL4AL1F8VTS6 287 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 SWI5Q1ZZU3 235 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 MUC15Q8N387 334 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 ZDHHC22Q8N966 263 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 TERB2Q8NHR7 220 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 HPS1Q92902 700 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 MRGPRFQ96AM1 343 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 DECR2Q9NUI1 292 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 TANC2Q9HCD6 1990 aa20.52■□□□□ 0.88
U2AF1-204ENST00000459639 TMEM82A0PJX8 343 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 HMX3A6NHT5 357 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 OR2AT4A6NND4 320 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 SDCBPO00560 298 aaPredicted RBP20.51■□□□□ 0.87
U2AF1-204ENST00000459639 C1QL1O75973 258 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 RLN1P04808 185 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 IL5P05113 134 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 KCNJ3P48549 501 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 ZNF880Q6PDB4 577 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 ZNF497Q6ZNH5 498 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 LHFPL1Q86WI0 220 aa20.51■□□□□ 0.87
U2AF1-204ENST00000459639 GAPTQ8N292 157 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms