RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ZNF724A8MTY0 619 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 GNRHRP30968 328 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 RTL6Q6ICC9 239 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 TBC1D26Q86UD7 250 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 ZNF561Q8N587 486 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 OR5C1Q8NGR4 320 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 SLC35B3Q9H1N7 401 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 GSN-AS1Q9NRJ2 163 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 TMEM38BQ9NVV0 291 aa16.89■□□□□ 0.3
CNEP1R1-203ENST00000458059 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 LOC102725191A0A1B0GVB3 256 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 H0YL77 283 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 COX6A1P12074 109 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 LYPD6BQ8NI32 183 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 SUCNR1Q9BXA5 334 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 MRPS17Q9Y2R5 130 aaKnown RBP16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 OTX2P32243 289 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 NKX2-1P43699 371 aaPredicted RBP16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 HIST1H3AP68431 136 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 HIST2H3PS2Q5TEC6 136 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 HIST2H3AQ71DI3 136 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 C17orf78Q8N4C9 275 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 GALNT14Q96FL9 552 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 BOD1Q96IK1 185 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 FOXB1Q99853 325 aa16.89■□□□□ 0.29
CNEP1R1-203ENST00000458059 IGHV3-64DA0A0J9YX35 117 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 VAMP5O95183 116 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR2C1O95371 312 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR8U8P0C7N1 319 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 PDZD11Q5EBL8 140 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 GAPTQ8N292 157 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 MOB3AQ96BX8 217 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 DECR2Q9NUI1 292 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 TRAV39A0A0B4J263 110 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 IGKV1D-13A0A0B4J2D9 117 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 MPPED1O15442 326 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 PDCD6O75340 191 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 CLN5O75503 358 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 IGKV1-13P0DP09 117 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 BCL3P20749 454 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 PLA2G5P39877 138 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 HLA-BQ31612 363 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 ZNF488Q96MN9 340 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 WNT5BQ9H1J7 359 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 MIOXQ9UGB7 285 aa16.88■□□□□ 0.29
CNEP1R1-203ENST00000458059 EDN3P14138 238 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 DTYMKP23919 212 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 GPM6AP51674 278 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 VAMP2P63027 116 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 ZNF154Q13106 437 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 ZNF818PQ6ZRF7 136 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 LHFPL2Q6ZUX7 228 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 EXTL1Q92935 676 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 ANGPTL4Q9BY76 406 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 GLRX2Q9NS18 164 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 PATE3B3GLJ2 98 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 AGAP20933 346 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 HAAOP46952 286 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 CXCL12P48061 93 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 RPS23P62266 143 aaKnown RBP16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 RAC1P63000 192 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 TCEAL3Q969E4 200 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 HSF4Q9ULV5 492 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 POMT1Q9Y6A1 747 aa16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 DSPP15924 2871 aaKnown RBP16.87■□□□□ 0.29
CNEP1R1-203ENST00000458059 DYNLT3P51808 116 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 RBM11P57052 281 aaKnown RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 ZNF239Q16600 458 aaKnown RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 CPEB3Q8NE35 698 aaKnown RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 IFI44Q8TCB0 444 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 PBDC1Q9BVG4 233 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR2H1Q9GZK4 316 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 ARV1Q9H2C2 271 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 CCL28Q9NRJ3 127 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 TOX3O15405 576 aaPredicted RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 KLF7O75840 302 aaPredicted RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 TMEM50AO95807 157 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 ACER2Q5QJU3 275 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 PRR18Q8N4B5 295 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR56B2PQ8NGI1 322 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR1J1Q8NGS3 322 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR51H1Q8NH63 302 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 OR10D3Q8NH80 312 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 BCL2L14Q9BZR8 327 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 UBE2CO00762 179 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 CA11O75493 328 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 FOLR2P14207 255 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 FOXG1P55316 489 aaPredicted RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 GPR157Q5UAW9 335 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 VASH2Q86V25 355 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 IMMP1LQ96LU5 166 aa16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 UBE2ZQ9H832 354 aaPredicted RBP16.86■□□□□ 0.29
CNEP1R1-203ENST00000458059 TERTO14746 1132 aaKnown RBP16.85■□□□□ 0.29
CNEP1R1-203ENST00000458059 FUT3P21217 361 aa16.85■□□□□ 0.29
CNEP1R1-203ENST00000458059 IL13RA2Q14627 380 aa16.85■□□□□ 0.29
CNEP1R1-203ENST00000458059 DAZAP2Q15038 168 aaPredicted RBP16.85■□□□□ 0.29
CNEP1R1-203ENST00000458059 FAM209BQ5JX69 171 aa16.85■□□□□ 0.29
CNEP1R1-203ENST00000458059 DPPA2Q7Z7J5 298 aa16.85■□□□□ 0.29
CNEP1R1-203ENST00000458059 SPEM1Q8N4L4 309 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms