RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CYCSP99999 105 aaKnown RBP11.67□□□□□ -0.54
CLK3-203ENST00000454830 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 RBMXL3Q8N7X1 1067 aaKnown RBP11.67□□□□□ -0.54
CLK3-203ENST00000454830 STARD4Q96DR4 205 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 GPHA2Q96T91 129 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 LIME1Q9H400 295 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 C1orf123Q9NWV4 160 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.66□□□□□ -0.54
CLK3-203ENST00000454830 J3QT63 122 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 TMEM211Q6ICI0 200 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 Q6ZS92 163 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 SCCPDHQ8NBX0 429 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 TP53TG5Q9Y2B4 290 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 LSM5Q9Y4Y9 91 aaKnown RBP11.66□□□□□ -0.54
CLK3-203ENST00000454830 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
CLK3-203ENST00000454830 LUMP51884 338 aaPredicted RBP11.66□□□□□ -0.54
CLK3-203ENST00000454830 MUCL1Q96DR8 90 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 OR2S2Q9NQN1 319 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 DKK4Q9UBT3 224 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 DMXL2Q8TDJ6 3036 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 POLEQ07864 2286 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 CRHP06850 196 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 OR5AC1P0C628 307 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 SYT3Q9BQG1 590 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 GSX2Q9BZM3 304 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 POLDIP2Q9Y2S7 368 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 MEMO1Q9Y316 297 aa11.66□□□□□ -0.54
CLK3-203ENST00000454830 I3L521 148 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
CLK3-203ENST00000454830 RAC2P15153 192 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 ECI1P42126 302 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 COMMD7Q86VX2 200 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 TMEM200AQ86VY9 491 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 WDR31Q8NA23 367 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 RELL2Q8NC24 303 aaPredicted RBP11.65□□□□□ -0.54
CLK3-203ENST00000454830 SPACA1Q9HBV2 294 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 HSD17B6O14756 317 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 RCC1P18754 421 aaPredicted RBP11.65□□□□□ -0.54
CLK3-203ENST00000454830 HOXA4Q00056 320 aaPredicted RBP11.65□□□□□ -0.54
CLK3-203ENST00000454830 ZNF154Q13106 437 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
CLK3-203ENST00000454830 SURF2Q15527 256 aaPredicted RBP11.65□□□□□ -0.54
CLK3-203ENST00000454830 MPV17LQ2QL34 196 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 FBXW12Q6X9E4 464 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 ZNF75AQ96N20 296 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 PLK3Q9H4B4 646 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 TRAPPC2LQ9UL33 140 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 COL6A6A6NMZ7 2263 aa11.65□□□□□ -0.54
CLK3-203ENST00000454830 TNFSF13O75888 250 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 RPA2P15927 270 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 CEBPDP49716 269 aaPredicted RBP11.65□□□□□ -0.55
CLK3-203ENST00000454830 SMCO1Q147U7 214 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 FAM74A1Q5RGS3 127 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 SAXO1Q8IYX7 474 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 SLC5A7Q9GZV3 580 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 RAB18Q9NP72 206 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 SLC2A9Q9NRM0 540 aa11.65□□□□□ -0.55
CLK3-203ENST00000454830 UBE2J1Q9Y385 318 aaPredicted RBP11.65□□□□□ -0.55
CLK3-203ENST00000454830 A0A0D9SG52 128 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 TNFSF12O43508 249 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 PPYP01298 95 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 RAB32Q13637 225 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 PLSCR4Q9NRQ2 329 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 RRP8O43159 456 aaKnown RBP11.64□□□□□ -0.55
CLK3-203ENST00000454830 CD8AP01732 235 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 DHODHQ02127 395 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 ACOT7LQ6ZUV0 252 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 ASB13Q8WXK3 278 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 MRPL24Q96A35 216 aaKnown RBP11.64□□□□□ -0.55
CLK3-203ENST00000454830 DIDO1Q9BTC0 2240 aaKnown RBP11.64□□□□□ -0.55
CLK3-203ENST00000454830 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 P2RY6Q15077 328 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 FIP1L1Q6UN15 594 aaKnown RBP11.64□□□□□ -0.55
CLK3-203ENST00000454830 IGFL3Q6UXB1 125 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 SPACA3Q8IXA5 215 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 S100PBPQ96BU1 408 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
CLK3-203ENST00000454830 PURGQ9UJV8 347 aaKnown RBP11.64□□□□□ -0.55
CLK3-203ENST00000454830 FBXO9Q9UK97 447 aaPredicted RBP11.64□□□□□ -0.55
CLK3-203ENST00000454830 KIR2DS1A0A191URI9 304 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 LRP5LA4QPB2 252 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 OR5H1A6NKK0 313 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
CLK3-203ENST00000454830 PRRG2O14669 202 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 SNAPC5O75971 98 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 KIR2DS4P43632 304 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 IL24Q13007 206 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 KIR2DS1Q14954 304 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 ELP2Q6IA86 826 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 CCDC71LQ8N9Z2 235 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 C2orf50Q96LR7 162 aa11.63□□□□□ -0.55
CLK3-203ENST00000454830 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms