RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 HTR2CP28335 458 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 MEF2CQ06413 473 aaPredicted RBP22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 SCGB2A2Q13296 93 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 EDDM3AQ14507 147 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 VMO1Q7Z5L0 202 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 TMEM104Q8NE00 496 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 OR6M1Q8NGM8 313 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 SLC25A28Q96A46 364 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 PPA2Q9H2U2 334 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 VCX3AQ9NNX9 186 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 ZNF581Q9P0T4 197 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 TRAV40A0A0B4J280 105 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 A0A1W2PPH5 198 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 SLC17A2O00624 439 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 IFNA2P01563 188 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 PSMD7P51665 324 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 ZNF273Q14593 569 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 MPV17LQ2QL34 196 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 OR51E2Q9H255 320 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 BANF2Q9H503 90 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 UNKLQ9H9P5 680 aaKnown RBP22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 SSR3Q9UNL2 185 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 V9GY05 133 aa22.98■■□□□ 1.27
SMARCC1-203ENST00000454240 JMJD1CQ15652 2540 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 CENPVL3A0A0U1RRI6 287 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 MGMTP16455 207 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 CD36P16671 472 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 MYL9P24844 172 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 BLMHQ13867 455 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 C11orf42Q8N5U0 333 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 TPRX1Q8N7U7 411 aa22.97■■□□□ 1.27
SMARCC1-203ENST00000454240 IGHV3OR16-10A0A075B7F0 116 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 PDCD5O14737 125 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 CRTAPO75718 401 aaPredicted RBP22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 OR7C1O76099 320 aaPredicted RBP22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 VSIG8P0DPA2 414 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 P2RX3P56373 397 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 AESQ08117 197 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 TAF9Q16594 264 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 TUSC1Q2TAM9 212 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 PAN3Q58A45 887 aaKnown RBP22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 GPR157Q5UAW9 335 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 METAP1DQ6UB28 335 aaPredicted RBP22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 TCF23Q7RTU1 214 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 CST11Q9H112 138 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 METTL8Q9H825 291 aaKnown RBP22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 PLGRKTQ9HBL7 147 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 ZNF69Q9UC07 566 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 KIAA2026Q5HYC2 2103 aa22.96■■□□□ 1.27
SMARCC1-203ENST00000454240 hADV38S2A0JD32 116 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 FUOMA2VDF0 154 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 CCL3L1P16619 93 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 PRTN3P24158 256 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 GADD45AP24522 165 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 DLX6P56179 175 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 BPIFB3P59826 476 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 QRFPP83859 136 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 C9orf139Q6ZV77 190 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 SUMF2Q8NBJ7 301 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 TNFRSF14Q92956 283 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 LHX4Q969G2 390 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 COQ2Q96H96 371 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 Q96M66 194 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 SELENOIQ9C0D9 397 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 SIRT7Q9NRC8 400 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 LINC00312Q9Y6C7 94 aa22.95■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A10PA6NDY2 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A18PA6NE21 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A16PA6NEW6 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A20PA6NIJ5 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A8PA6NJQ4 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A7PA6NKC0 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A22PA8MWA6 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A12PA8MX19 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A5PA8MXJ8 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A23PA8MXZ1 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 HSPB6O14558 160 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 BPNT1O95861 308 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A15PP0C7V4 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A13PP0C7W8 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A14PP0C7W9 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM90A24PP0C7X0 464 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FPR2P25090 351 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 GLIPR1P48060 266 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 ATXN7L3Q14CW9 347 aaPredicted RBP22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 BPIFB2Q8N4F0 458 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 C22orf15Q8WYQ4 148 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 FAM46BQ96A09 425 aa22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 DPCDQ9BVM2 203 aaPredicted RBP22.94■■□□□ 1.26
SMARCC1-203ENST00000454240 C17orf98A8MV24 154 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 TMEM14DPA8MWL7 114 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 SMIM18P0DKX4 95 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 RAB3BP20337 219 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 KCNJ3P48549 501 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 DLX1P56177 255 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 OR10A3P58181 314 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 PAX5Q02548 391 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 RAB11BQ15907 218 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 KRBOX4Q5JUW0 171 aa22.93■■□□□ 1.26
SMARCC1-203ENST00000454240 OR10K2Q6IF99 312 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms