RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 H2AFY2Q9P0M6 372 aaPredicted RBP11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
LYSMD3-202ENST00000453259 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 AQP12BA6NM10 295 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 OR2H2O95918 312 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 TMEM11P17152 192 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 BCL3P20749 454 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 NPBWR2P48146 333 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 CRISP1P54107 249 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 MTCP1P56278 107 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 RBM39Q14498 530 aaKnown RBP11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 TMEM236Q5W0B7 351 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 TMEM179BQ7Z7N9 219 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 AQP12AQ8IXF9 295 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 ADGRG5Q8IZF4 528 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 YIPF7Q8N8F6 280 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 ZNF565Q8N9K5 539 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 HAVCR2Q8TDQ0 301 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 FAM107BQ9H098 131 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 LINC00574Q9H8X3 128 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 IL36RNQ9UBH0 155 aa11.26□□□□□ -0.61
LYSMD3-202ENST00000453259 KBTBD11-OT1A0A1B0GTJ5 212 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 B2RBV5 119 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 SIRPB1O00241 398 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 FAM107AO95990 144 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 ELANEP08246 267 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 DUSP1P28562 367 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 GLIPR1P48060 266 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 MS4A2Q01362 244 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 AESQ08117 197 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 PDZK1IP1Q13113 114 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 FOXE3Q13461 319 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 PNLIPRP3Q17RR3 467 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 CXorf66Q5JRM2 361 aaPredicted RBP11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 KRBOX4Q5JUW0 171 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 AADACL4Q5VUY2 407 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 OR10A7Q8NGE5 316 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 KIRREL1Q96J84 757 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 DCLRE1BQ9H816 532 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 NEK6Q9HC98 313 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 ZNF446Q9NWS9 450 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 ZNF256Q9Y2P7 627 aaPredicted RBP11.25□□□□□ -0.61
LYSMD3-202ENST00000453259 METTL15A6NJ78 407 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 J3QR06 171 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 CCRL2O00421 344 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 RRP9O43818 475 aaKnown RBP11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 PRKYO43930 277 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 KDM4BO94953 1096 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 OR2T7P0C7T2 308 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 POU3F4P49335 361 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 LUMP51884 338 aaPredicted RBP11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 RAB25P57735 213 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 PAX5Q02548 391 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 EBI3Q14213 229 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 HES1Q14469 280 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 PTGES3Q15185 160 aaKnown RBP11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 PLEKHG7Q6ZR37 379 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 TMEM163Q8TC26 289 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 WARS2Q9UGM6 360 aaKnown RBP11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 GSTK1Q9Y2Q3 226 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
LYSMD3-202ENST00000453259 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 FAM172BPA6NC97 362 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 INMTO95050 263 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 RPP14O95059 124 aaKnown RBP11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 MT-ND2P03891 347 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 ZNF44P15621 663 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 GDNFP39905 211 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 ECI1P42126 302 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 EFNB1P98172 346 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 BNIP1Q12981 228 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 FHL3Q13643 280 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 C17orf58Q2M2W7 97 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 TMEM244Q5VVB8 128 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 FAHD1Q6P587 224 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 OR8H1Q8NGG4 311 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 OR51T1Q8NGJ9 327 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 CANT1Q8WVQ1 401 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 COQ2Q96H96 371 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 OPALINQ96PE5 141 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 PRR25Q96S07 402 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 CHCHD6Q9BRQ6 235 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
LYSMD3-202ENST00000453259 KRTAP3-2Q9BYR7 98 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms