RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 C17orf107Q6ZR85 190 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 Q6ZTK2 550 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 NLRC3Q7RTR2 1065 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 ASCC1Q8N9N2 400 aaKnown RBP12.19□□□□□ -0.46
SHANK2-210ENST00000449116 ZNRF1Q8ND25 227 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 TMEM185AQ8NFB2 350 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 NEIL1Q96FI4 390 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-210ENST00000449116 ARHGAP5-AS1Q96IT6 56 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 DPCDQ9BVM2 203 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-210ENST00000449116 SHARPINQ9H0F6 387 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 FAM234AQ9H0X4 552 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 PATZ1Q9HBE1 687 aaKnown RBP12.19□□□□□ -0.46
SHANK2-210ENST00000449116 PLEKHJ1Q9NW61 149 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 EXTL2Q9UBQ6 330 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 DUX4Q9UBX2 424 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
SHANK2-210ENST00000449116 IGHV4-61A0A0C4DH41 118 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 MCRIP1C9JLW8 97 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 F5H0A9 414 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-210ENST00000449116 K7N7A8 449 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 HSPB6O14558 160 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 NDUFB3O43676 98 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 TK1P04183 234 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 WNT2P09544 360 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 SELLP14151 372 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 OR3A1P47881 315 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 KCNJ3P48549 501 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 RBM39Q14498 530 aaKnown RBP12.18□□□□□ -0.46
SHANK2-210ENST00000449116 ARL6IP1Q15041 203 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 TMEM69Q5SWH9 247 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 CNIH2Q6PI25 160 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 C6orf201Q7Z4U5 140 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 OR4M1Q8NGD0 313 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 CLDND2Q8NHS1 167 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 DIRAS2Q96HU8 199 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 PECRQ9BY49 303 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 CHST6Q9GZX3 395 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 PPA2Q9H2U2 334 aa12.18□□□□□ -0.46
SHANK2-210ENST00000449116 SLC25A10Q9UBX3 287 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-210ENST00000449116 TRAV18A0A075B6X5 111 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 DVL1O14640 695 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 CSN2P05814 226 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
SHANK2-210ENST00000449116 GNB3P16520 340 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 TNFSF8P32971 234 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 GRK1Q15835 563 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 IZUMO1Q8IYV9 350 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 OR8H2Q8N162 312 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 BPIFB2Q8N4F0 458 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 DTX3Q8N9I9 347 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 OR4S1Q8NGB4 309 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 NEK7Q8TDX7 302 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 Q96MF0 132 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 SULT4A1Q9BR01 284 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 PDZD2O15018 2839 aa12.17□□□□□ -0.46
SHANK2-210ENST00000449116 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 MFNGO00587 321 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 MGST3O14880 152 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 HEXAP06865 529 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 GSTP1P09211 210 aaKnown RBP12.16□□□□□ -0.46
SHANK2-210ENST00000449116 NDUFB7P17568 137 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 USF1P22415 310 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-210ENST00000449116 MNDAP41218 407 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 NPY4RP50391 375 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 TAS2R20P59543 309 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 LMO4P61968 165 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 ATXN7L3Q14CW9 347 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-210ENST00000449116 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 BAIAP2L2Q6UXY1 529 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 ZNF841Q6ZN19 808 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 LINC00299Q6ZSB3 139 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 ZMAT3Q9HA38 289 aaKnown RBP12.16□□□□□ -0.46
SHANK2-210ENST00000449116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.464e-8■■■■■ 28.9
SHANK2-210ENST00000449116 ETAA1Q9NY74 926 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 VPS13CQ709C8 3753 aa12.16□□□□□ -0.46
SHANK2-210ENST00000449116 A0A096LNT2 108 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 UBE2QL1A1L167 161 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 GPR37O15354 613 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 FCN3O75636 299 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 TPPPO94811 219 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 ERP29P30040 261 aaKnown RBP12.15□□□□□ -0.46
SHANK2-210ENST00000449116 SEC61A1P61619 476 aaKnown RBP12.15□□□□□ -0.46
SHANK2-210ENST00000449116 PAX5Q02548 391 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms