RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 H3BNC9 293 aa2.59□□□□□ -2
CHD9-203ENST00000447540 SDCBPO00560 298 aaPredicted RBP2.59□□□□□ -2
CHD9-203ENST00000447540 KCNQ2O43526 872 aa2.59□□□□□ -2
CHD9-203ENST00000447540 ATP5G1P05496 136 aa2.59□□□□□ -2
CHD9-203ENST00000447540 EVI2AP22794 236 aa2.59□□□□□ -2
CHD9-203ENST00000447540 TACR1P25103 407 aa2.59□□□□□ -2
CHD9-203ENST00000447540 VIPR2P41587 438 aa2.59□□□□□ -2
CHD9-203ENST00000447540 ATP5G3P48201 142 aa2.59□□□□□ -2
CHD9-203ENST00000447540 RHOAP61586 193 aa2.59□□□□□ -2
CHD9-203ENST00000447540 ATP5G2Q06055 141 aa2.59□□□□□ -2
CHD9-203ENST00000447540 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.59□□□□□ -2
CHD9-203ENST00000447540 TP53I3Q53FA7 332 aa2.59□□□□□ -2
CHD9-203ENST00000447540 ZNF595Q8IYB9 648 aa2.59□□□□□ -2
CHD9-203ENST00000447540 C12orf76Q8N812 135 aaPredicted RBP2.59□□□□□ -2
CHD9-203ENST00000447540 GPR32P1Q8NGA4 272 aa2.59□□□□□ -2
CHD9-203ENST00000447540 MRPL30Q8TCC3 161 aaKnown RBP2.59□□□□□ -2
CHD9-203ENST00000447540 ATG10Q9H0Y0 220 aa2.59□□□□□ -2
CHD9-203ENST00000447540 LSM7Q9UK45 103 aaKnown RBP2.59□□□□□ -2
CHD9-203ENST00000447540 TET1Q8NFU7 2136 aa2.59□□□□□ -2
CHD9-203ENST00000447540 BLACEA4D250 179 aa2.59□□□□□ -2
CHD9-203ENST00000447540 FCN1O00602 326 aa2.59□□□□□ -2
CHD9-203ENST00000447540 SLC16A7O60669 478 aa2.59□□□□□ -2
CHD9-203ENST00000447540 DHRS3O75911 302 aa2.59□□□□□ -2
CHD9-203ENST00000447540 SMIM10L1P0DMW3 83 aa2.59□□□□□ -2
CHD9-203ENST00000447540 NTF3P20783 257 aa2.59□□□□□ -2
CHD9-203ENST00000447540 DRD3P35462 400 aa2.59□□□□□ -2
CHD9-203ENST00000447540 OR8B8Q15620 311 aa2.59□□□□□ -2
CHD9-203ENST00000447540 BRICD5Q6PL45 260 aa2.59□□□□□ -2
CHD9-203ENST00000447540 DHRS13Q6UX07 377 aa2.59□□□□□ -2
CHD9-203ENST00000447540 TMEM108Q6UXF1 575 aa2.59□□□□□ -2
CHD9-203ENST00000447540 H2BFWTQ7Z2G1 175 aa2.59□□□□□ -2
CHD9-203ENST00000447540 GLCCI1Q86VQ1 547 aa2.59□□□□□ -2
CHD9-203ENST00000447540 OR51G1Q8NGK1 321 aa2.59□□□□□ -2
CHD9-203ENST00000447540 VSTM2AQ8TAG5 236 aa2.59□□□□□ -2
CHD9-203ENST00000447540 MARCH1Q8TCQ1 289 aa2.59□□□□□ -2
CHD9-203ENST00000447540 ZNF418Q8TF45 676 aaPredicted RBP2.59□□□□□ -2
CHD9-203ENST00000447540 SMIM10Q96HG1 83 aa2.59□□□□□ -2
CHD9-203ENST00000447540 KLHDC3Q9BQ90 382 aa2.59□□□□□ -2
CHD9-203ENST00000447540 MAP1LC3CQ9BXW4 147 aa2.59□□□□□ -2
CHD9-203ENST00000447540 LY75O60449 1722 aa2.59□□□□□ -2
CHD9-203ENST00000447540 A0A1W2PR48 441 aa2.59□□□□□ -2
CHD9-203ENST00000447540 PROB1E7EW31 1015 aa2.59□□□□□ -2
CHD9-203ENST00000447540 DDAH2O95865 285 aa2.59□□□□□ -2
CHD9-203ENST00000447540 TIMM23BQ5SRD1 257 aa2.59□□□□□ -2
CHD9-203ENST00000447540 METRNLQ641Q3 311 aa2.59□□□□□ -2
CHD9-203ENST00000447540 PGBD5Q8N414 524 aa2.59□□□□□ -2
CHD9-203ENST00000447540 CYB561D1Q8N8Q1 229 aa2.59□□□□□ -2
CHD9-203ENST00000447540 PECRQ9BY49 303 aa2.59□□□□□ -2
CHD9-203ENST00000447540 GPR35Q9HC97 309 aa2.59□□□□□ -2
CHD9-203ENST00000447540 YAE1D1Q9NRH1 226 aa2.59□□□□□ -2
CHD9-203ENST00000447540 MSRAQ9UJ68 235 aa2.59□□□□□ -2
CHD9-203ENST00000447540 FUT9Q9Y231 359 aa2.59□□□□□ -2
CHD9-203ENST00000447540 GVINP1Q7Z2Y8 2422 aa2.58□□□□□ -2
CHD9-203ENST00000447540 SAA2-SAA4A0A096LPE2 208 aa2.58□□□□□ -2
CHD9-203ENST00000447540 A0A0G2JK05 382 aa2.58□□□□□ -2
CHD9-203ENST00000447540 TMEM8BA6NDV4 472 aa2.58□□□□□ -2
CHD9-203ENST00000447540 SYNGR1O43759 233 aa2.58□□□□□ -2
CHD9-203ENST00000447540 B3GAT3O94766 335 aa2.58□□□□□ -2
CHD9-203ENST00000447540 CD160O95971 181 aa2.58□□□□□ -2
CHD9-203ENST00000447540 S100A7P31151 101 aa2.58□□□□□ -2
CHD9-203ENST00000447540 GJA4P35212 333 aa2.58□□□□□ -2
CHD9-203ENST00000447540 ZNF136P52737 540 aa2.58□□□□□ -2
CHD9-203ENST00000447540 C1orf100Q5SVJ3 147 aa2.58□□□□□ -2
CHD9-203ENST00000447540 PRSS57Q6UWY2 283 aa2.58□□□□□ -2
CHD9-203ENST00000447540 DGAT2L6Q6ZPD8 337 aa2.58□□□□□ -2
CHD9-203ENST00000447540 C16orf82Q7Z2V1 217 aa2.58□□□□□ -2
CHD9-203ENST00000447540 SGMS2Q8NHU3 365 aa2.58□□□□□ -2
CHD9-203ENST00000447540 HOXB13Q92826 284 aaPredicted RBP2.58□□□□□ -2
CHD9-203ENST00000447540 WDR61Q9GZS3 305 aaKnown RBP2.58□□□□□ -2
CHD9-203ENST00000447540 CHST8Q9H2A9 424 aa2.58□□□□□ -2
CHD9-203ENST00000447540 BPIFA1Q9NP55 256 aa2.58□□□□□ -2
CHD9-203ENST00000447540 G6PC2Q9NQR9 355 aa2.58□□□□□ -2
CHD9-203ENST00000447540 PPP1R11O60927 126 aaPredicted RBP2.58□□□□□ -2
CHD9-203ENST00000447540 ALOX12BO75342 701 aa2.58□□□□□ -2
CHD9-203ENST00000447540 NID1P14543 1247 aa2.58□□□□□ -2
CHD9-203ENST00000447540 GDF1P27539 372 aa2.58□□□□□ -2
CHD9-203ENST00000447540 RND3P61587 244 aa2.58□□□□□ -2
CHD9-203ENST00000447540 EWSR1Q01844 656 aaKnown RBP eCLIP2.58□□□□□ -24e-8■■■□□ 17.8
CHD9-203ENST00000447540 RAB32Q13637 225 aa2.58□□□□□ -2
CHD9-203ENST00000447540 SOWAHAQ2M3V2 549 aa2.58□□□□□ -2
CHD9-203ENST00000447540 ITPRIPL2Q3MIP1 535 aa2.58□□□□□ -2
CHD9-203ENST00000447540 ZNF761Q86XN6 746 aaPredicted RBP2.58□□□□□ -2
CHD9-203ENST00000447540 ZNF695Q8IW36 515 aa2.58□□□□□ -2
CHD9-203ENST00000447540 DMRTC2Q8IXT2 367 aaPredicted RBP2.58□□□□□ -2
CHD9-203ENST00000447540 DNAJA3Q96EY1 480 aa2.58□□□□□ -2
CHD9-203ENST00000447540 ALKBH3Q96Q83 286 aaPredicted RBP2.58□□□□□ -2
CHD9-203ENST00000447540 HES4Q9HCC6 221 aa2.58□□□□□ -2
CHD9-203ENST00000447540 MRPL17Q9NRX2 175 aaKnown RBP2.58□□□□□ -2
CHD9-203ENST00000447540 ELOVL5Q9NYP7 299 aa2.58□□□□□ -2
CHD9-203ENST00000447540 POLR1DQ9Y2S0 133 aa2.58□□□□□ -2
CHD9-203ENST00000447540 CENPVL1A0A0U1RR11 272 aa2.58□□□□□ -2
CHD9-203ENST00000447540 ANTXRLA6NF34 631 aa2.58□□□□□ -2
CHD9-203ENST00000447540 C17orf105B2RV13 164 aa2.58□□□□□ -2
CHD9-203ENST00000447540 TISP43B9A030 160 aa2.58□□□□□ -2
CHD9-203ENST00000447540 K7N7A8 449 aa2.58□□□□□ -2
CHD9-203ENST00000447540 PSEN2P49810 448 aa2.58□□□□□ -2
CHD9-203ENST00000447540 TAS2R45P59539 299 aa2.58□□□□□ -2
CHD9-203ENST00000447540 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
CHD9-203ENST00000447540 SNRPNP63162 240 aaKnown RBP2.58□□□□□ -2
CHD9-203ENST00000447540 C9orf57Q5W0N0 161 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms