RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 LIMS4P0CW20 117 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 CDK2P24941 298 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 HTR1DP28221 377 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 CD34P28906 385 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 BLCAPP62952 87 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 BDH1Q02338 343 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 IL18R1Q13478 541 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ABHD12Q8N2K0 398 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OR5AK2Q8NH90 309 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 NDNFQ8TB73 568 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 GAL3ST2Q9H3Q3 398 aa12.72□□□□□ -0.37
SPTLC1P1-201ENST00000447199 A0A087X0M5 115 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 A0A1B0GX30 115 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 FUOMA2VDF0 154 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ADARB2-AS1A8MUL3 147 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 CCDC159P0C7I6 412 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 CD28P10747 220 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ZNF44P15621 663 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 GTF2A1P52655 376 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 SLC34A1Q06495 639 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 FBLN7Q53RD9 439 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ZNF691Q5VV52 312 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ELP2Q6IA86 826 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OR52W1Q6IF63 320 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 RTN4RL2Q86UN3 420 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 Q8NFD4 153 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 PXT1Q8NFP0 134 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OR51T1Q8NGJ9 327 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OCSTAMPQ9BR26 566 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ZNF286AQ9HBT8 521 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 NEK6Q9HC98 313 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 FGF20Q9NP95 211 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 DPM3Q9P2X0 92 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 RPL36Q9Y3U8 105 aaKnown RBP12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 PCDHGB5Q9Y5G0 923 aa12.71□□□□□ -0.37
SPTLC1P1-201ENST00000447199 NOTCH3Q9UM47 2321 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 G3V4G9 280 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 FBXO24O75426 580 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 HCKP08631 526 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 CGB3P0DN86 165 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 CGB7P0DN87 165 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 TMEM225BP0DP42 221 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 MTNR1BP49286 362 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 GBX2P52951 348 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 SMN1Q16637 294 aaKnown RBP12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 BEAN1Q3B7T3 259 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 UTF1Q5T230 341 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 KPRPQ5T749 579 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 LPCAT4Q643R3 524 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 XAF1Q6GPH4 301 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 OR51A2Q8NGJ7 313 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
SPTLC1P1-201ENST00000447199 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 GABRPO00591 440 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 DEGS1O15121 323 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 PTGFRP43088 359 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 PAX5Q02548 391 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 SCN1BQ07699 218 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 KRBOX4Q5JUW0 171 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 ASCL4Q6XD76 172 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 C16orf82Q7Z2V1 217 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 LYG1Q8N1E2 194 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 TSEN15Q8WW01 171 aaKnown RBP12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 NCOR1P1Q9H4R4 102 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
SPTLC1P1-201ENST00000447199 FAM172BPA6NC97 362 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 LEUTXA8MZ59 168 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 H0YJX3 145 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 BUB1B-PAK6H3BSN5 160 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 RAB3AP20336 220 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 ETV1P50549 477 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 TMEM95Q3KNT9 176 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 CCDC58Q4VC31 144 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 CNIH3Q8TBE1 160 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 RDH12Q96NR8 316 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 CITED2Q99967 270 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 LIN7BQ9HAP6 207 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 OR6C3Q9NZP0 311 aa12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 SIRT4Q9Y6E7 314 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P1-201ENST00000447199 KBTBD11-OT1A0A1B0GTJ5 212 aa12.67□□□□□ -0.38
SPTLC1P1-201ENST00000447199 AMY1AP04745 511 aa12.67□□□□□ -0.38
SPTLC1P1-201ENST00000447199 AMY2AP04746 511 aa12.67□□□□□ -0.38
SPTLC1P1-201ENST00000447199 CD24P25063 80 aa12.67□□□□□ -0.38
SPTLC1P1-201ENST00000447199 DCKP27707 260 aa12.67□□□□□ -0.38
SPTLC1P1-201ENST00000447199 VDAC2P45880 294 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1P1-201ENST00000447199 IL13RA2Q14627 380 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms