RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CLEC18AA5D8T8 446 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF716A6NP11 495 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 B4GALT1P15291 398 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 NQO2P16083 231 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 PLCXD3Q63HM9 321 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 DPPA2Q7Z7J5 298 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 CLEC18CQ8NCF0 446 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 WNT5BQ9H1J7 359 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 KIAA1456Q9P272 454 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 DUXBA0A1W2PPF3 345 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A10PA6NDY2 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A18PA6NE21 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A16PA6NEW6 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A20PA6NIJ5 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A8PA6NJQ4 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A7PA6NKC0 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF724A8MTY0 619 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A22PA8MWA6 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A12PA8MX19 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A5PA8MXJ8 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A23PA8MXZ1 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 HSPA12AO43301 675 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 OR2C1O95371 312 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A15PP0C7V4 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A13PP0C7W8 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A14PP0C7W9 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FAM90A24PP0C7X0 464 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 ASCL1P50553 236 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 NOVA1P51513 510 aaKnown RBP16.45■□□□□ 0.22
SDCBP-204ENST00000447182 OR2B8PP59922 312 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 PCBD1P61457 104 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 IL11RAQ14626 422 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 IGSF11Q5DX21 431 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 NAXEQ8NCW5 288 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 HIPK2Q9H2X6 1198 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 PRUNE2Q8WUY3 3088 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF732B4DXR9 585 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 RPL36A-HNRNPH2H7BZ11 118 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 CLN5O75503 358 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 PATE4P0C8F1 98 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 S100PP25815 95 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 POLR2GP62487 172 aaKnown RBP eCLIP16.45■□□□□ 0.22
SDCBP-204ENST00000447182 CCL20P78556 96 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 TBC1D26Q86UD7 250 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 WDR5BQ86VZ2 330 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF695Q8IW36 515 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 SELENOHQ8IZQ5 122 aaKnown RBP16.45■□□□□ 0.22
SDCBP-204ENST00000447182 TMEM252Q8N6L7 170 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 TMEM171Q8WVE6 324 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 KCNE4Q8WWG9 221 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 PIGCQ92535 297 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 SPSB4Q96A44 273 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 FOXB1Q99853 325 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 TCFL5Q9UL49 500 aa16.45■□□□□ 0.22
SDCBP-204ENST00000447182 UBE2J1Q9Y385 318 aaPredicted RBP16.45■□□□□ 0.22
SDCBP-204ENST00000447182 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
SDCBP-204ENST00000447182 GPR37O15354 613 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 OR7C1O76099 320 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-204ENST00000447182 MMP9P14780 707 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 MLF1P58340 268 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 PDCD1Q15116 288 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 RIPPLY2Q5TAB7 128 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 RPS19BP1Q86WX3 136 aaKnown RBP16.44■□□□□ 0.22
SDCBP-204ENST00000447182 CALHM1Q8IU99 346 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF611Q8N823 705 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 MUCL1Q96DR8 90 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 ALKBH3Q96Q83 286 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-204ENST00000447182 TMPRSS5Q9H3S3 457 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 SLC7A10Q9NS82 523 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 ZMAT5Q9UDW3 170 aaKnown RBP16.44■□□□□ 0.22
SDCBP-204ENST00000447182 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
SDCBP-204ENST00000447182 A0A087WWC5 75 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 A0A1B0GV50 99 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 PROB1E7EW31 1015 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 PPIHO43447 177 aaKnown RBP16.43■□□□□ 0.22
SDCBP-204ENST00000447182 KLF7O75840 302 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-204ENST00000447182 SRD5A2P31213 254 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 CARD18P57730 90 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 AAED1Q7RTV5 226 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 GGNQ86UU5 652 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 SAP25Q8TEE9 199 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 PARPBPQ9NWS1 579 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 P4HTMQ9NXG6 502 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 CNTRLQ7Z7A1 2325 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 ID3Q02535 119 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 BAXQ07812 192 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 ZFP62Q8NB50 900 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-204ENST00000447182 FGFBP3Q8TAT2 258 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 GNPNAT1Q96EK6 184 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-204ENST00000447182 ABHD14AQ9BUJ0 271 aa16.43■□□□□ 0.22
SDCBP-204ENST00000447182 TK1P04183 234 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 CEACAM1P13688 526 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 FOXO1Q12778 655 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 SDK2Q58EX2 2172 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 NMSQ5H8A3 153 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 ABLIM2Q6H8Q1 611 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 SUMF1Q8NBK3 374 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 OR5C1Q8NGR4 320 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 EXTL1Q92935 676 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms