RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CCDC159P0C7I6 412 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 VSIG10L2P0DP72 767 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 ZNF44P15621 663 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 CDK2P24941 298 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 BLCAPP62952 87 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 MRPL28Q13084 256 aaKnown RBP16.68■□□□□ 0.26
SDC1-205ENST00000447124 C2orf68Q2NKX9 166 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 ZNF691Q5VV52 312 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 ABHD12Q8N2K0 398 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 OR51A2Q8NGJ7 313 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 JAM3Q9BX67 310 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 RHOFQ9HBH0 211 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 ING3Q9NXR8 418 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 TAS2R3Q9NYW6 316 aa16.68■□□□□ 0.26
SDC1-205ENST00000447124 SIRT4Q9Y6E7 314 aaPredicted RBP16.68■□□□□ 0.26
SDC1-205ENST00000447124 TRGV10A0A0A0MS01 117 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 DEGS1O15121 323 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 CLIC3O95833 236 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 SOX2P48431 317 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 ETV1P50549 477 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 SLC34A1Q06495 639 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 HEPN1Q6WQI6 88 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 NDNFQ8TB73 568 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 WIPF2Q8TF74 440 aaPredicted RBP16.67■□□□□ 0.26
SDC1-205ENST00000447124 NOTCH3Q9UM47 2321 aa16.67■□□□□ 0.26
SDC1-205ENST00000447124 ODAMA1E959 279 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 FAM172BPA6NC97 362 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 CSN2P05814 226 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
SDC1-205ENST00000447124 CGB3P0DN86 165 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 CGB7P0DN87 165 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 HTR1DP28221 377 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 C17orf58Q2M2W7 97 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 KRBOX4Q5JUW0 171 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 OR2G6Q5TZ20 316 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 ELP2Q6IA86 826 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 C1QL4Q86Z23 238 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 CHST4Q8NCG5 386 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 PXT1Q8NFP0 134 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 CNIH3Q8TBE1 160 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 TSEN15Q8WW01 171 aaKnown RBP16.66■□□□□ 0.26
SDC1-205ENST00000447124 NR1H4Q96RI1 486 aaPredicted RBP16.66■□□□□ 0.26
SDC1-205ENST00000447124 PPIL3Q9H2H8 161 aaKnown RBP16.66■□□□□ 0.26
SDC1-205ENST00000447124 SMPD3Q9NY59 655 aaPredicted RBP16.66■□□□□ 0.26
SDC1-205ENST00000447124 TAS2R4Q9NYW5 299 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 DPM3Q9P2X0 92 aa16.66■□□□□ 0.26
SDC1-205ENST00000447124 FUOMA2VDF0 154 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 GABRPO00591 440 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 IGLV1-47P01700 117 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 MTNR1BP49286 362 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 BDH1Q02338 343 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 RPL22L1Q6P5R6 122 aaKnown RBP16.65■□□□□ 0.26
SDC1-205ENST00000447124 ASCL4Q6XD76 172 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 LYG1Q8N1E2 194 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 DTX3Q8N9I9 347 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 ZNF555Q8NEP9 628 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 WNT10AQ9GZT5 417 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 GAL3ST2Q9H3Q3 398 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 ZNF286AQ9HBT8 521 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 PITPNC1Q9UKF7 332 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 PCDHGB5Q9Y5G0 923 aa16.65■□□□□ 0.26
SDC1-205ENST00000447124 TRAV24A0A0B4J272 114 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 F2RL2O00254 374 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 CD28P10747 220 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 RAB3AP20336 220 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 CD24P25063 80 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 DCKP27707 260 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 CD34P28906 385 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 ATXN7L3Q14CW9 347 aaPredicted RBP16.64■□□□□ 0.25
SDC1-205ENST00000447124 ZSCAN26Q16670 478 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 FBLN7Q53RD9 439 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 OR52W1Q6IF63 320 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 RTN4RL2Q86UN3 420 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 Q8NFD4 153 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 OR10K1Q8NGX5 313 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 RDH12Q96NR8 316 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 PRSS22Q9GZN4 317 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 CLEC2DQ9UHP7 191 aa16.64■□□□□ 0.25
SDC1-205ENST00000447124 H0YJX3 145 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 OGG1O15527 345 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 LALBAP00709 142 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 CCDC58Q4VC31 144 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 OR51T1Q8NGJ9 327 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 HAVCR2Q8TDQ0 301 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 GPR148Q8TDV2 347 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 TNFAIP8L1Q8WVP5 186 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 ORAI1Q96D31 301 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 OR5M11Q96RB7 305 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 ZNF581Q9P0T4 197 aa16.63■□□□□ 0.25
SDC1-205ENST00000447124 LY6LH3BQJ8 138 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 HSPB6O14558 160 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 ALDOBP05062 364 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 LRRC36Q1X8D7 754 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 TMEM95Q3KNT9 176 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 ZNF596Q8TC21 504 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 GPER1Q99527 375 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 OCSTAMPQ9BR26 566 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 BABAM2Q9NXR7 383 aa16.62■□□□□ 0.25
SDC1-205ENST00000447124 A0A087X0M5 115 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms