RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PAX6P26367 422 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 GLIPR1P48060 266 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 UBE2E1P51965 193 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 GP2P55259 537 aaKnown RBP12.1□□□□□ -0.47
HDAC4-204ENST00000446876 P2RX3P56373 397 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 RPS25P62851 125 aaKnown RBP12.1□□□□□ -0.47
HDAC4-204ENST00000446876 AESQ08117 197 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 SLC22A6Q4U2R8 563 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 PPP1R35Q8TAP8 253 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 TBC1D15Q8TC07 691 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 UFD1Q92890 307 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 TMEM203Q969S6 136 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 SLC25A28Q96A46 364 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 COQ2Q96H96 371 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 METTL9Q9H1A3 318 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 FOXJ3Q9UPW0 622 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 FAM96BQ9Y3D0 163 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 TRAV24A0A0B4J272 114 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 CLDN34H7C241 214 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 MAPK3P27361 379 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 MEF2CQ06413 473 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 PAN3Q58A45 887 aaKnown RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 TRAPPC6BQ86SZ2 158 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 Q8NFD4 153 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 OR4D6Q8NGJ1 314 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 OR51T1Q8NGJ9 327 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 GCDHQ92947 438 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 S100A13Q99584 98 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 CHIAQ9BZP6 476 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 PPIL3Q9H2H8 161 aaKnown RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 ZMAT3Q9HA38 289 aaKnown RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 IL36GQ9NZH8 169 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 BLOC1S6Q9UL45 172 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 SF3B6Q9Y3B4 125 aaKnown RBP12.09□□□□□ -0.47
HDAC4-204ENST00000446876 LINC00312Q9Y6C7 94 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 STAB1Q9NY15 2570 aa12.09□□□□□ -0.47
HDAC4-204ENST00000446876 hCG_1809904A0A1W2PP81 198 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 A0A1W2PPE2 198 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 A0A1W2PR64 198 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 A0A1W2PRV1 198 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 TMEM89A2RUT3 159 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 MMP23AO75900 390 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 CSTBP04080 98 aaKnown RBP12.08□□□□□ -0.48
HDAC4-204ENST00000446876 FBP1P09467 338 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 ERP29P30040 261 aaKnown RBP12.08□□□□□ -0.48
HDAC4-204ENST00000446876 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
HDAC4-204ENST00000446876 MLLT11Q13015 90 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-204ENST00000446876 TPBGQ13641 420 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 KRBOX4Q5JUW0 171 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 AWAT2Q6E213 333 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 GLIPR1L1Q6UWM5 242 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 CEACAM19Q7Z692 300 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 LYPD6Q86Y78 171 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 LDLRAD3Q86YD5 345 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 MS4A15Q8N5U1 240 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 CHST4Q8NCG5 386 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 AJUBAQ96IF1 538 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 HEXA-AS1Q9H8Q6 139 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 ST3GAL6Q9Y274 331 aa12.08□□□□□ -0.48
HDAC4-204ENST00000446876 ODAMA1E959 279 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 GEMIN2O14893 280 aaKnown RBP12.07□□□□□ -0.48
HDAC4-204ENST00000446876 DENRO43583 198 aaKnown RBP12.07□□□□□ -0.48
HDAC4-204ENST00000446876 SC5DO75845 299 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 PAHP00439 452 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 IER3P46695 156 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 GPR50Q13585 617 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 TBCEQ15813 527 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-204ENST00000446876 PRAMEF5Q5TYX0 476 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 BAIAP2L2Q6UXY1 529 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 LHFPL4Q7Z7J7 247 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 PLPPR1Q8TBJ4 325 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 THRSPQ92748 146 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 MGLLQ99685 303 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 Q9H521 79 aa12.07□□□□□ -0.48
HDAC4-204ENST00000446876 ANK2Q01484 3957 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 TRGV10A0A0A0MS01 117 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 FAM172BPA6NC97 362 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 FAM181BA6NEQ2 426 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 CLPXO76031 633 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 OR7C1O76099 320 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-204ENST00000446876 RBP4P02753 201 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 CSN2P05814 226 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 UCHL1P09936 223 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 CPEP16870 476 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 OMGP23515 440 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 GDNFP39905 211 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 GABARAPL2P60520 117 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 TAF9Q16594 264 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 MIDNQ504T8 468 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms