RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SUMF2Q8NBJ7 301 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 ZNF680Q8NEM1 530 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 DPCDQ9BVM2 203 aaPredicted RBP16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 NMES1Q9C002 83 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 CXXC4Q9H2H0 198 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 PIGMQ9H3S5 423 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 CRYM-AS1A6NIL9 109 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 RHBDL1O75783 438 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 IFNA2P01563 188 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 IFNA7P01567 189 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 PGA5P0DJD9 388 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 FCGR2CP31995 323 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 MDH2P40926 338 aaKnown RBP16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 NAAAQ02083 359 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 ZNF154Q13106 437 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 Q8NA96 180 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 NEK7Q8TDX7 302 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 MOB3AQ96BX8 217 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 NRIP2Q9BQI9 281 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 LIME1Q9H400 295 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 CHD8Q9HCK8 2581 aa16.05■□□□□ 0.16
SEMA3D-202ENST00000444867 SVILO95425 2214 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 TIMM8AO60220 97 aaPredicted RBP16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 NOS1APO75052 506 aaPredicted RBP16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 MPC2O95563 127 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 CTXN2P0C2S0 81 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 SERPINF1P36955 418 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 HTR2BP41595 481 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 UCNP55089 124 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 SHEQ5VZ18 495 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 C11orf87Q6NUJ2 197 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 Q6P435 159 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 TMUB2Q71RG4 321 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 SLC38A6Q8IZM9 456 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 S100PBPQ96BU1 408 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 MUCL1Q96DR8 90 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 TREM2Q9NZC2 230 aa16.04■□□□□ 0.16
SEMA3D-202ENST00000444867 TRAV24A0A0B4J272 114 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 A0A1B0GWJ7 208 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 C5orf51A6NDU8 294 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 FAM25EA8MYX2 175 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 DEGS1O15121 323 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 KNG1P01042 644 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 DUSP1P28562 367 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 TMPRSS3P57727 454 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 HERV-K104P61576 105 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 MZT1Q08AG7 82 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 ANKRD55Q3KP44 614 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 FIP1L1Q6UN15 594 aaKnown RBP16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 CISD2Q8N5K1 135 aaKnown RBP16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 PPP1R1CQ8WVI7 109 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 SEC22AQ96IW7 307 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 C1orf123Q9NWV4 160 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 SPEF1Q9Y4P9 236 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 ATP23Q9Y6H3 246 aa16.03■□□□□ 0.16
SEMA3D-202ENST00000444867 LOC400499M0QZD8 3231 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 TRDCB7Z8K6 153 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 H7C1Q1 480 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 MLNRO43193 412 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 RBMXP38159 391 aaKnown RBP16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 ZNF146Q15072 292 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 ABCA11PQ4W5N1 156 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 SPIN3Q5JUX0 258 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 ZNF880Q6PDB4 577 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 ZNF546Q86UE3 836 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 DOLPP1Q86YN1 238 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 POC1AQ8NBT0 407 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 VRK1Q99986 396 aaPredicted RBP16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 USB1Q9BQ65 265 aaKnown RBP16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 MFFQ9GZY8 342 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 TLNRD1Q9H1K6 362 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 TINAGQ9UJW2 476 aa16.02■□□□□ 0.16
SEMA3D-202ENST00000444867 A0A0D9SG52 128 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 TEX13DA0A0J9YY54 714 aaPredicted RBP16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 A8MXE2 369 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 H0YL77 283 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 DIRAS3O95661 229 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 RGS7BPQ6MZT1 257 aaPredicted RBP16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 CCDC71LQ8N9Z2 235 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 MRPL30Q8TCC3 161 aaKnown RBP16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 TOMM40LQ969M1 308 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 SYT3Q9BQG1 590 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 RSRP1Q9BUV0 290 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 UBQLN2Q9UHD9 624 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 ZNF835Q9Y2P0 537 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 KCNIP3Q9Y2W7 256 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 MAB21L2Q9Y586 359 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 C13orf42A0A1B0GVH6 325 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 EEF1E1-BLOC1S5C9J1V9 151 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 CDIPTO14735 213 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 HS3ST1O14792 307 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 RP2O75695 350 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 NXPH2O95156 264 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 TK1P04183 234 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 GRPP07492 148 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 ZNF44P15621 663 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 AADACP22760 399 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 ZNF83P51522 516 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 PIGPP57054 158 aa16.01■□□□□ 0.15
SEMA3D-202ENST00000444867 ZNF345Q14585 488 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms