RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 POM121L2Q96KW2 1035 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 RCC2Q9P258 522 aaKnown RBP13.74□□□□□ -0.21
SHQ1-202ENST00000444040 FREM1Q5H8C1 2179 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 ARID1AO14497 2285 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 GNRHRP30968 328 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 TMEM88Q6PEY1 159 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 WFDC1Q9HC57 220 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 Q9N2K0 584 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 ABI3Q9P2A4 366 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 IL36RNQ9UBH0 155 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 TMED3Q9Y3Q3 217 aa13.74□□□□□ -0.21
SHQ1-202ENST00000444040 MPPED1O15442 326 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 TPD52L2O43399 206 aaKnown RBP13.73□□□□□ -0.21
SHQ1-202ENST00000444040 CD5P06127 495 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 CD59P13987 128 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 NOVA1P51513 510 aaKnown RBP13.73□□□□□ -0.21
SHQ1-202ENST00000444040 RAB1AP62820 205 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 FBXW12Q6X9E4 464 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 SPAG16Q8N0X2 631 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 SLC35G3Q8N808 338 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 OR4D5Q8NGN0 318 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 APH1AQ96BI3 265 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 C3orf85A0A1B0GTC6 90 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 ZNF732B4DXR9 585 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 PRSS44E7EML9 344 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 RNASEK-C17orf49H0YIS7 233 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 GPR137BO60478 399 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 ID4P47928 161 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 GPR157Q5UAW9 335 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 DHRS7BQ6IAN0 325 aaPredicted RBP13.73□□□□□ -0.21
SHQ1-202ENST00000444040 DMBX1Q8NFW5 382 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 AIFM2Q9BRQ8 373 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 ZFP57Q9NU63 452 aa13.73□□□□□ -0.21
SHQ1-202ENST00000444040 ST8SIA3O43173 380 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 P2RY1P47900 373 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 F2RL1P55085 397 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 IL13RA2Q14627 380 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 TMEM164Q5U3C3 297 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 Q6ZRG5 221 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 NUFIP2Q7Z417 695 aaKnown RBP13.72□□□□□ -0.21
SHQ1-202ENST00000444040 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
SHQ1-202ENST00000444040 ZNF552Q9H707 407 aaPredicted RBP13.72□□□□□ -0.21
SHQ1-202ENST00000444040 FAM86C1Q9NVL1 165 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
SHQ1-202ENST00000444040 SCTP09683 121 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 ARR3P36575 388 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 NPBWR1P48145 328 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 HERPUD1Q15011 391 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 FAM185AQ8N0U4 392 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 TMEM222Q9H0R3 208 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 FAM157AC9JC47 383 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 SNAPINO95295 136 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 GLAP06280 429 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 C3AR1Q16581 482 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 MPV17LQ2QL34 196 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 CBLN2Q8IUK8 224 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 OR5A2Q8NGI9 324 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 IL17BQ9UHF5 180 aa13.72□□□□□ -0.21
SHQ1-202ENST00000444040 TNRC6AQ8NDV7 1962 aaKnown RBP13.71□□□□□ -0.21
SHQ1-202ENST00000444040 C9JQL5 133 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 SEC11BP0C7V7 166 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 PLGLB1Q02325 96 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 MEX3BQ6ZN04 569 aaKnown RBP13.71□□□□□ -0.21
SHQ1-202ENST00000444040 DPPA2Q7Z7J5 298 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 GINS3Q9BRX5 216 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 C11orf1Q9H5F2 150 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 PRELID1Q9Y255 219 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 RCL1Q9Y2P8 373 aaKnown RBP13.71□□□□□ -0.21
SHQ1-202ENST00000444040 POMT1Q9Y6A1 747 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 AHCTF1Q8WYP5 2266 aa13.71□□□□□ -0.21
SHQ1-202ENST00000444040 CD300LBA8K4G0 201 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 AGPAT2O15120 278 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 SYNGR1O43759 233 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 SP9P0CG40 484 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 HFEQ30201 348 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 HAGHLQ6PII5 290 aaPredicted RBP13.71□□□□□ -0.22
SHQ1-202ENST00000444040 MKXQ8IYA7 352 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 TMEM56Q96MV1 263 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 TMEM56-RWDD3S4R434 201 aa13.71□□□□□ -0.22
SHQ1-202ENST00000444040 TRDCB7Z8K6 153 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 CDX4O14627 284 aaPredicted RBP13.7□□□□□ -0.22
SHQ1-202ENST00000444040 SP1P08047 785 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 OR8U9P0C7N5 309 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 RND3P61587 244 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
SHQ1-202ENST00000444040 TSC22D1Q15714 1073 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 TBC1D26Q86UD7 250 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 OR8U1Q8NH10 309 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
SHQ1-202ENST00000444040 NDRG3Q9UGV2 375 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 TRAPPC2LH3BP13 241 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 TUSC2O75896 110 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 CDS2O95674 445 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 MT-CO3P00414 261 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 TK1P04183 234 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 DANCRP0C864 163 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 SPP1P10451 314 aa13.7□□□□□ -0.22
SHQ1-202ENST00000444040 WNT5AP41221 380 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms