RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 NDUFB8O95169 186 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 KLF8O95600 359 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-206ENST00000441438 VCANP13611 3396 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-206ENST00000441438 HRH1P35367 487 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 APOBEC1P41238 236 aaKnown RBP9.02□□□□□ -0.97
SYNE2-206ENST00000441438 DEFA1P59665 94 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 DEFA3P59666 94 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 TCF15Q12870 199 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 FAM53BQ14153 422 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 B3GNTL1Q67FW5 361 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-206ENST00000441438 LAIR2Q6ISS4 152 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 OAFQ86UD1 273 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 CBLN2Q8IUK8 224 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 OR6K6Q8NGW6 343 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 CARHSP1Q9Y2V2 147 aaKnown RBP9.02□□□□□ -0.97
SYNE2-206ENST00000441438 CHEK1O14757 476 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 LALBAP00709 142 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM241Q24JQ0 296 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 SFXN4Q6P4A7 337 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 YIPF7Q8N8F6 280 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 OR1L8Q8NGR8 309 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM159Q96B96 161 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 FAM173AQ9BQD7 235 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM126AQ9H061 195 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 OR51I2Q9H344 312 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 ZDHHC11Q9H8X9 412 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 TNFRSF12AQ9NP84 129 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 A0A1W2PP18 115 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 COLCA2A8K830 154 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 A8MT66 165 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ZIC3O60481 467 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 AGFG2O95081 481 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM225BP0DP42 221 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 HOXB6P17509 224 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 TCN2P20062 427 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ISL1P61371 349 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RAB40BQ12829 278 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ARL9Q6T311 187 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ALKAL1Q6UXT8 129 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 C6orf120Q7Z4R8 191 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF555Q8NEP9 628 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RSPRY1Q96DX4 576 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 Q96M66 194 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RPP25Q9BUL9 199 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 MAGIXQ9H6Y5 334 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ZFC3H1O60293 1989 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 LRIT2A6NDA9 550 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM200CA6NKL6 621 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 PIRTP0C851 137 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 DUTP33316 252 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 DCST2Q5T1A1 773 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 NXNL2Q5VZ03 156 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 AGTRAPQ6RW13 159 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 P2RY8Q86VZ1 359 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 TMEFF1Q8IYR6 380 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 C15orf54Q8N8G6 183 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 WDR31Q8NA23 367 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 ATOH8Q96SQ7 321 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 PSMG3Q9BT73 122 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 COX11Q9Y6N1 276 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 IGHV2OR16-5A0A0B4J2B6 119 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 EEDO75530 441 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RPL7P18124 248 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 NPY1RP25929 384 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RAB38P57729 211 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RYBPQ8N488 228 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 BMPERQ8N8U9 685 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 GPR148Q8TDV2 347 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 RND1Q92730 232 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 POP5Q969H6 163 aaKnown RBP9.01□□□□□ -0.97
SYNE2-206ENST00000441438 DUSP21Q9H596 190 aa9.01□□□□□ -0.97
SYNE2-206ENST00000441438 A0A087WUU8 490 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 ATP6AP2A0A1C7CYW4 349 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF814B7Z6K7 855 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 HCRTR1O43613 425 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 SULT1A3P0DMM9 295 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 SULT1A4P0DMN0 295 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
SYNE2-206ENST00000441438 RHEBQ15382 184 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 C19orf54Q5BKX5 351 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 DCBLD2Q96PD2 775 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 GFI1Q99684 422 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 EBPLQ9BY08 206 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 AKTIPQ9H8T0 292 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 FBXL12Q9NXK8 326 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 H3BTX0 84 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 HSD17B6O14756 317 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 STK17BO94768 372 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 CD52P31358 61 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 IL2RGP31785 369 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF154Q13106 437 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 PEA15Q15121 130 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 TCTEX1D1Q8N7M0 179 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 FNDC9Q8TBE3 224 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 UPRTQ96BW1 309 aa9□□□□□ -0.97
SYNE2-206ENST00000441438 APOL4Q9BPW4 351 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms