RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DOCK8Q8NF50 2099 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 DIDO1Q9BTC0 2240 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 XKRY2A2RUG3 117 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 FAM157AC9JC47 383 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 MPPED1O15442 326 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 TRAPPC6AO75865 159 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 PPYP01298 95 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 SRP19P09132 144 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 SNRPCP09234 159 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 B4GALT1P15291 398 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 HIST1H1BP16401 226 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 FUT3P21217 361 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 ZNF774Q6NX45 483 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 ALKBH3Q96Q83 286 aaPredicted RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 UCN2Q96RP3 112 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 NUDT16L1Q9BRJ7 211 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 GPR87Q9BY21 358 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 MAP1BP46821 2468 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 A0A1W2PPC4 97 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 H7BYZ3 331 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 K7N7A8 449 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 MASP2O00187 686 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 METTL15P1P0C7V9 234 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 TCN2P20062 427 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 FGF7P21781 194 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.15
COPB1-202ENST00000439561 ZP4Q12836 540 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 HIKESHIQ53FT3 197 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 SPANXN5Q5MJ07 72 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 CST9LP1Q5W188 147 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 UNQ6494/PRO21346Q6UXR6 183 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 GALNT14Q96FL9 552 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 BOD1Q96IK1 185 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 MRGPRX4Q96LA9 322 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 ZNF385AQ96PM9 386 aaKnown RBP7.88□□□□□ -1.15
COPB1-202ENST00000439561 LIME1Q9H400 295 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 SLC39A9Q9NUM3 307 aa7.88□□□□□ -1.15
COPB1-202ENST00000439561 CD300LBA8K4G0 201 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 DHHO43323 396 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 PPIHO43447 177 aaKnown RBP7.87□□□□□ -1.15
COPB1-202ENST00000439561 ZFAND5O76080 213 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 IFNA1P01562 189 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 GALNSP34059 522 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 H3F3AP84243 136 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 CLN3Q13286 438 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 PMS2P11Q13670 270 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 ZNF705AQ6ZN79 300 aaPredicted RBP7.87□□□□□ -1.15
COPB1-202ENST00000439561 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 WDR5BQ86VZ2 330 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 LYPD6Q86Y78 171 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 GAPTQ8N292 157 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 LHX4Q969G2 390 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 LYZL4Q96KX0 146 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 SLC7A10Q9NS82 523 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 B3GAT1Q9P2W7 334 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 ABCA7Q8IZY2 2146 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 IGHV3-64DA0A0J9YX35 117 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 SHISA7A6NL88 538 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 TRAF3IP2O43734 574 aaPredicted RBP7.87□□□□□ -1.15
COPB1-202ENST00000439561 ZNF17P17021 662 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 SRPXP78539 464 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 IL15RAQ13261 267 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 OR8G1Q15617 311 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 NCR3LG1Q68D85 454 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 OR6X1Q8NH79 312 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 AURKAIP1Q9NWT8 199 aaPredicted RBP7.87□□□□□ -1.15
COPB1-202ENST00000439561 FBLN5Q9UBX5 448 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 ELOA3CA0A087WX78 387 aaPredicted RBP7.87□□□□□ -1.15
COPB1-202ENST00000439561 HS3ST1O14792 307 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 SLC31A2O15432 143 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 ST8SIA5O15466 376 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 FAM185AQ8N0U4 392 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 RDH5Q92781 318 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 MISP3Q96FF7 219 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 OR6C1Q96RD1 312 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 MMP17Q9ULZ9 603 aa7.87□□□□□ -1.15
COPB1-202ENST00000439561 TP53I11O14683 189 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 EFNA2O43921 213 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 DFFBO76075 338 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 IL2RGP31785 369 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 GLIPR1P48060 266 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 ICAM4Q14773 271 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 C9orf50Q5SZB4 431 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 C1orf53Q5VUE5 145 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 TCEAL6Q6IPX3 200 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 RHBDD1Q8TEB9 315 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 EXTL1Q92935 676 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 MVB12AQ96EY5 273 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 Q96M66 194 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 HIST1H2AAQ96QV6 131 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 IER2Q9BTL4 223 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 CCL28Q9NRJ3 127 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 IGKV3D-11A0A0A0MRZ8 115 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 RPL29P47914 159 aaKnown RBP7.86□□□□□ -1.15
COPB1-202ENST00000439561 FASLGP48023 281 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 SUCLG1P53597 346 aaKnown RBP7.86□□□□□ -1.15
COPB1-202ENST00000439561 PMP22Q01453 160 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 PLPPR5Q32ZL2 321 aa7.86□□□□□ -1.15
COPB1-202ENST00000439561 ZNF574Q6ZN55 896 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms