RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 MAGEB3O15480 346 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 HTR3BO95264 441 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 MAS1P04201 325 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 ZNF44P15621 663 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 P2RX3P56373 397 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 RPS25P62851 125 aaKnown RBP10.8□□□□□ -0.68
LINC00399-201ENST00000439008 TPBGQ13641 420 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 LRRTM1Q86UE6 522 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 DYNAPQ8N1N2 210 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 PLPPR1Q8TBJ4 325 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 TMEM203Q969S6 136 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 MUL1Q969V5 352 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 ING3Q9NXR8 418 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 IL36GQ9NZH8 169 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 FOXJ3Q9UPW0 622 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 MEIOCA2RUB1 952 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 MEGF11A6BM72 1044 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 HSPB6O14558 160 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 DEGS1O15121 323 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 DENRO43583 198 aaKnown RBP10.79□□□□□ -0.68
LINC00399-201ENST00000439008 COX7A1P24310 79 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 ERP29P30040 261 aaKnown RBP10.79□□□□□ -0.68
LINC00399-201ENST00000439008 IER3P46695 156 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 RELBQ01201 579 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 GUCA2AQ02747 115 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 MEF2CQ06413 473 aaPredicted RBP10.79□□□□□ -0.68
LINC00399-201ENST00000439008 BLMHQ13867 455 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 ATXN7L3Q14CW9 347 aaPredicted RBP10.79□□□□□ -0.68
LINC00399-201ENST00000439008 RSU1Q15404 277 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 TAF9Q16594 264 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 RBM48Q5RL73 367 aaKnown RBP10.79□□□□□ -0.68
LINC00399-201ENST00000439008 NCR3LG1Q68D85 454 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 FIP1L1Q6UN15 594 aaKnown RBP10.79□□□□□ -0.68
LINC00399-201ENST00000439008 LHFPL4Q7Z7J7 247 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 LDLRAD3Q86YD5 345 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 GFI1Q99684 422 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 CCDC90BQ9GZT6 254 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 ZNRD1Q9P1U0 126 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 LINC00312Q9Y6C7 94 aa10.79□□□□□ -0.68
LINC00399-201ENST00000439008 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 GEMIN2O14893 280 aaKnown RBP10.78□□□□□ -0.68
LINC00399-201ENST00000439008 CSN2P05814 226 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 UCHL1P09936 223 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 HSMCR30P0CW71 290 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 CGB3P0DN86 165 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 CGB7P0DN87 165 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 IGHV1-8P0DP01 117 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 HKR1P10072 659 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 CD37P11049 281 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 CPEP16870 476 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 JUNBP17275 347 aaPredicted RBP10.78□□□□□ -0.68
LINC00399-201ENST00000439008 SERPINA2P20848 420 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 COMPP49747 757 aaPredicted RBP10.78□□□□□ -0.68
LINC00399-201ENST00000439008 RBM11P57052 281 aaKnown RBP10.78□□□□□ -0.68
LINC00399-201ENST00000439008 ACTG1P63261 375 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 GPR50Q13585 617 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 IL13RA2Q14627 380 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 SSX1Q16384 188 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 SLC22A6Q4U2R8 563 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 NHLRC3Q5JS37 347 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 C16orf87Q6PH81 154 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 JAGN1Q8N5M9 183 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 TMEM104Q8NE00 496 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 TBC1D15Q8TC07 691 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 ZNF714Q96N38 554 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 MGLLQ99685 303 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 METTL9Q9H1A3 318 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 ISYNA1Q9NPH2 558 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 ACOT13Q9NPJ3 140 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 GLS2Q9UI32 602 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 ST3GAL6Q9Y274 331 aa10.78□□□□□ -0.68
LINC00399-201ENST00000439008 MRPS28Q9Y2Q9 187 aaKnown RBP10.78□□□□□ -0.68
LINC00399-201ENST00000439008 hADV38S2A0JD32 116 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 ODAMA1E959 279 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 FAM90A8PA6NJQ4 464 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 ODF3BA8MYP8 253 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 OMGP23515 440 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 EEF1B2P24534 225 aaKnown RBP10.77□□□□□ -0.69
LINC00399-201ENST00000439008 FABP5Q01469 135 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 EMX1Q04741 257 aaPredicted RBP10.77□□□□□ -0.69
LINC00399-201ENST00000439008 MLLT11Q13015 90 aaPredicted RBP10.77□□□□□ -0.69
LINC00399-201ENST00000439008 TBCEQ15813 527 aaPredicted RBP10.77□□□□□ -0.69
LINC00399-201ENST00000439008 C17orf58Q2M2W7 97 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 AWAT1Q58HT5 328 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 PRAMEF5Q5TYX0 476 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 RSBN1Q5VWQ0 802 aaPredicted RBP10.77□□□□□ -0.69
LINC00399-201ENST00000439008 GLIPR1L1Q6UWM5 242 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 CEACAM19Q7Z692 300 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 OSR2Q8N2R0 312 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 MS4A15Q8N5U1 240 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 SUMF2Q8NBJ7 301 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 CHST4Q8NCG5 386 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 CORO2AQ92828 525 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 GCDHQ92947 438 aaPredicted RBP10.77□□□□□ -0.69
LINC00399-201ENST00000439008 SLC25A28Q96A46 364 aa10.77□□□□□ -0.69
LINC00399-201ENST00000439008 CPNE2Q96FN4 548 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms