RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SUCLG1P53597 346 aaKnown RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 DEFB133Q30KQ1 61 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 NCR3LG1Q68D85 454 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 ODF3L1Q8IXM7 274 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 M1APQ8TC57 530 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 BADQ92934 168 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 HIST1H2AAQ96QV6 131 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 ZFHX4Q86UP3 3567 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 IGKV1-27A0A075B6S5 117 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 LIPT2A6NK58 231 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 VSTM2BA6NLU5 285 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 CHST1O43916 411 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 GNRHRP30968 328 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 GNB2P62879 340 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 TESK1Q15569 626 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 RBM24Q9BX46 236 aaKnown RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 POU2F2P09086 479 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 IDH3GP51553 393 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 PHYHD1Q5SRE7 291 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 FAM90A2PQ658T7 463 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 RTL6Q6ICC9 239 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 TEX38Q6PEX7 206 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF695Q8IW36 515 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 MRPL41Q8IXM3 137 aaKnown RBP11.6□□□□□ -0.55
ACTN1-204ENST00000438964 LRRC61Q9BV99 259 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 TMED3Q9Y3Q3 217 aa11.6□□□□□ -0.55
ACTN1-204ENST00000438964 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-204ENST00000438964 IGHG1P01857 330 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 CA3P07451 260 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 GZMHP20718 246 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 FGF7P21781 194 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 HERV-K104P61576 105 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF266Q14584 549 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 PRAMEF20Q5VT98 475 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 FUT9Q9Y231 359 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 KIR2DS5A0A0G2JLQ3 304 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 A0A0G2JNG1 304 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 G3V3Y1 287 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 CLDN34H7C241 214 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 KIR2DS3K7RE56 304 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 SCGB1D1O95968 90 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 IAPPP10997 89 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 IL13RA2Q14627 380 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 KIR2DS5Q14953 304 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 NOXO1Q8NFA2 376 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 OR1K1Q8NGR3 316 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 UBALD1Q8TB05 177 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 PCGF1Q9BSM1 259 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 MRPL13Q9BYD1 178 aaKnown RBP11.59□□□□□ -0.55
ACTN1-204ENST00000438964 ZNF442Q9H7R0 627 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 RPRMQ9NS64 109 aa11.59□□□□□ -0.55
ACTN1-204ENST00000438964 C3orf85A0A1B0GTC6 90 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 OR7C1O76099 320 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-204ENST00000438964 RABIFP47224 123 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-204ENST00000438964 OR4D5Q8NGN0 318 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 LMX1AQ8TE12 382 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 Q96M66 194 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 NUDT16L1Q9BRJ7 211 aaKnown RBP11.58□□□□□ -0.56
ACTN1-204ENST00000438964 PLEK2Q9NYT0 353 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 HSPA12AO43301 675 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 IFI6P09912 130 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 ZFP36L1Q07352 338 aaKnown RBP11.58□□□□□ -0.56
ACTN1-204ENST00000438964 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 TMEM234Q8WY98 164 aa11.58□□□□□ -0.56
ACTN1-204ENST00000438964 NPSP0C0P6 89 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 CAPZBP47756 277 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 ARL4DP49703 201 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 SLC10A1Q14973 349 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 C16orf82Q7Z2V1 217 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 D2HGDHQ8N465 521 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 GATAD1Q8WUU5 269 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 DDIT4LQ96D03 193 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 SLC7A10Q9NS82 523 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 TP53TG5Q9Y2B4 290 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 DCHS1Q96JQ0 3298 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 IGKV1-12A0A0C4DH73 117 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 IGKV1D-12P01611 117 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 ZNF506Q5JVG8 444 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 C9orf50Q5SZB4 431 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 THEM4Q5T1C6 240 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 DBX2Q6ZNG2 339 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 FAM185AQ8N0U4 392 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 OR1N1Q8NGS0 311 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 OR51H1Q8NH63 302 aa11.57□□□□□ -0.56
ACTN1-204ENST00000438964 SSC4DQ8WTU2 575 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms