RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ZNF107Q9UII5 783 aaPredicted RBP9.49□□□□□ -0.89
LINC00539-203ENST00000434601 CHD3Q12873 2000 aaKnown RBP9.49□□□□□ -0.89
LINC00539-203ENST00000434601 PLCE1Q9P212 2302 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 COL6A5A8TX70 2615 aa9.49□□□□□ -0.89
LINC00539-203ENST00000434601 USF3Q68DE3 2245 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 CENPXA8MT69 81 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 SRRM5B3KS81 715 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 H7C1Q1 480 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 WNT9BO14905 357 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 TPD52L2O43399 206 aaKnown RBP9.48□□□□□ -0.89
LINC00539-203ENST00000434601 SSX4O60224 188 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 EGR1P18146 543 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 FUT3P21217 361 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 DUSP1P28562 367 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 CFHR2P36980 270 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 PMELP40967 661 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 CBX5P45973 191 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 GMFBP60983 142 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 ZNF146Q15072 292 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 PDCD1Q15116 288 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 SWI5Q1ZZU3 235 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 SMIM21Q3B7S5 101 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 ATAD3CQ5T2N8 411 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 ACP7Q6ZNF0 438 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 DCDC5Q6ZRR9 648 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 OR11L1Q8NGX0 322 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 ENKURQ8TC29 256 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 Q8TCH9 128 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 DEDD2Q8WXF8 326 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 SULT4A1Q9BR01 284 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 EGLN1Q9GZT9 426 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 MS4A5Q9H3V2 200 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 SAP30LQ9HAJ7 183 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 GCM1Q9NP62 436 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 RASL12Q9NYN1 266 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 AK3Q9UIJ7 227 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 ANAPC10Q9UM13 185 aa9.48□□□□□ -0.89
LINC00539-203ENST00000434601 ATRQ13535 2644 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 HS3ST1O14792 307 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 HAND1O96004 215 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 KNG1P01042 644 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 ZNF44P15621 663 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 FAUP35544 74 aaKnown RBP9.47□□□□□ -0.89
LINC00539-203ENST00000434601 RFX2P48378 723 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 PPOXP50336 477 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 TAS2R19P59542 299 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 CCL8P80075 99 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 MRPS15P82914 257 aaKnown RBP9.47□□□□□ -0.89
LINC00539-203ENST00000434601 Q6P435 159 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 NRARPQ7Z6K4 114 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 GCSAMQ8N6F7 178 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 HPS1Q92902 700 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 PERPQ96FX8 193 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 CMSS1Q9BQ75 279 aaKnown RBP9.47□□□□□ -0.89
LINC00539-203ENST00000434601 FAAP24Q9BTP7 215 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 WDR13Q9H1Z4 485 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 HRASLSQ9HDD0 168 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 DECR2Q9NUI1 292 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 FAIMQ9NVQ4 179 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 RNF7Q9UBF6 113 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 GLS2Q9UI32 602 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 FBXO9Q9UK97 447 aaPredicted RBP9.47□□□□□ -0.89
LINC00539-203ENST00000434601 NPTNQ9Y639 398 aa9.47□□□□□ -0.89
LINC00539-203ENST00000434601 FBN3Q75N90 2809 aa9.46□□□□□ -0.89
LINC00539-203ENST00000434601 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.89
LINC00539-203ENST00000434601 TRAV24A0A0B4J272 114 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 FAM240BA0A1B0GVZ2 78 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 UBE2QL1A1L167 161 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 NAP1L6A6NFF2 107 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 MCRIP1C9JLW8 97 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.46□□□□□ -0.9
LINC00539-203ENST00000434601 HSPB6O14558 160 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 SH2D1BO14796 132 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.9
LINC00539-203ENST00000434601 DEGS1O15121 323 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 OR2H2O95918 312 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 MT-ND4P03905 459 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 GLAP06280 429 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 FCER2P06734 321 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 AKAIN1P0CW23 69 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 IRF2P14316 349 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 SPNP16150 400 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 NAT1P18440 290 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 DTYMKP23919 212 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 BTCP35070 178 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 HOXA4Q00056 320 aaPredicted RBP9.46□□□□□ -0.9
LINC00539-203ENST00000434601 AGAP6Q5VW22 663 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 Q6ZNX1 250 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 FAM90A1Q86YD7 464 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.9
LINC00539-203ENST00000434601 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 SUMF2Q8NBJ7 301 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 OR4C16Q8NGL9 310 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 NEK7Q8TDX7 302 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 DYRK2Q92630 601 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms