RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 HIST1H1DP16402 221 aaKnown RBP19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 TMEM50BP56557 158 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 RBM39Q14498 530 aaKnown RBP19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 PLAC9Q5JTB6 97 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 SHEQ5VZ18 495 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 LINC00299Q6ZSB3 139 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 NLRC3Q7RTR2 1065 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 C6orf201Q7Z4U5 140 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 IZUMO1Q8IYV9 350 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 DTX3Q8N9I9 347 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 ZNRF1Q8ND25 227 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 TMEM185AQ8NFB2 350 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 OR8B3Q8NGG8 313 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 NEK7Q8TDX7 302 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 NEIL1Q96FI4 390 aaPredicted RBP19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 OR8B2Q96RD0 313 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 FOXC2Q99958 501 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 PECRQ9BY49 303 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 FAM234AQ9H0X4 552 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 PPA2Q9H2U2 334 aa19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 PRRC2AP48634 2157 aaKnown RBP19.34■□□□□ 0.69
SMARCAL1-208ENST00000434435 TRAV18A0A075B6X5 111 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 A0A1B0GW55 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 TMEM82A0PJX8 343 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 PSPNO60542 156 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L2P0CJ85 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L3P0CJ86 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L4P0CJ87 422 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L5P0CJ88 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L6P0CJ89 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L7P0CJ90 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 SELLP14151 372 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 KCNJ3P48549 501 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 TAS2R20P59543 309 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4L9Q6RFH8 374 aaPredicted RBP19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 BAIAP2L2Q6UXY1 529 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 C17orf107Q6ZR85 190 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 CHST6Q9GZX3 395 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 PATZ1Q9HBE1 687 aaKnown RBP19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 CTSZQ9UBR2 303 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 DUX4Q9UBX2 424 aa19.33■□□□□ 0.68
SMARCAL1-208ENST00000434435 K7N7A8 449 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 MFNGO00587 321 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 NDUFB3O43676 98 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 GNB3P16520 340 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 OR3A1P47881 315 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 GRK1Q15835 563 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 LRRC10Q5BKY1 277 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 SPANXN2Q5MJ10 180 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 BRICD5Q6PL45 260 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 CCDC190Q86UF4 302 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 RTN4RL2Q86UN3 420 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 OR8H2Q8N162 312 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 OR4S1Q8NGB4 309 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 SULT4A1Q9BR01 284 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 RABL2AQ9UBK7 228 aaPredicted RBP19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 RABL2BQ9UNT1 228 aa19.32■□□□□ 0.68
SMARCAL1-208ENST00000434435 UBE2QL1A1L167 161 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 F5H0A9 414 aaPredicted RBP19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 TK1P04183 234 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 CSN2P05814 226 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 GSTP1P09211 210 aaKnown RBP19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 MNDAP41218 407 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 MADCAM1Q13477 382 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 ZNF260Q3ZCT1 412 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 CDNFQ49AH0 187 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 BPIFB2Q8N4F0 458 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 OR5D13Q8NGL4 314 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 CLDND2Q8NHS1 167 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 RAB39BQ96DA2 213 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 FAAP24Q9BTP7 215 aa19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 ZMAT3Q9HA38 289 aaKnown RBP19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 SLC25A10Q9UBX3 287 aaPredicted RBP19.31■□□□□ 0.68
SMARCAL1-208ENST00000434435 SERPINE3A8MV23 424 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 DVL1O14640 695 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 MGST3O14880 152 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 TPPPO94811 219 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 IGHV2-5P01817 119 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 WNT2P09544 360 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 IL18Q14116 193 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 ATXN7L3Q14CW9 347 aaPredicted RBP19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 KRTAP1-3Q8IUG1 177 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 ST8SIA4Q92187 359 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 SHARPINQ9H0F6 387 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 AUNIPQ9H7T9 357 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 ETAA1Q9NY74 926 aa19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 MRPS7Q9Y2R9 242 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-208ENST00000434435 CSMD2Q7Z408 3487 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 IGHV4-61A0A0C4DH41 118 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 TMEM235A6NFC5 223 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 FABP12A6NFH5 140 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 NPY4RP50391 375 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 ARFRP1Q13795 201 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 PNLIPRP3Q17RR3 467 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 FAM131AQ6UXB0 335 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 GDPD3Q7L5L3 318 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 C15orf40Q8WUR7 153 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 AK3Q9UIJ7 227 aa19.29■□□□□ 0.68
SMARCAL1-208ENST00000434435 CR1P17927 2039 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms