RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 FAM90A10PA6NDY2 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A18PA6NE21 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A16PA6NEW6 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A20PA6NIJ5 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A8PA6NJQ4 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A7PA6NKC0 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A22PA8MWA6 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A12PA8MX19 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A5PA8MXJ8 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A23PA8MXZ1 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 KNG1P01042 644 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A15PP0C7V4 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A13PP0C7W8 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A14PP0C7W9 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM90A24PP0C7X0 464 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF81P51508 661 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 GRK1Q15835 563 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAM76BQ5HYJ3 339 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 TIMM23BQ5SRD1 257 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 PXDC1Q5TGL8 231 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF660Q6AZW8 331 aaPredicted RBP14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAHD2BQ6P2I3 314 aaPredicted RBP14.17□□□□□ -0.14
USHBP1-203ENST00000431146 LINC00518Q8N0U6 118 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 OR8G5Q8NG78 346 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 MITD1Q8WV92 249 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 FAHD2AQ96GK7 314 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 SEC22AQ96IW7 307 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 PHB2Q99623 299 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 BCL2L14Q9BZR8 327 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF286AQ9HBT8 521 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 TMEM100Q9NV29 134 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 RCC2Q9P258 522 aaKnown RBP14.17□□□□□ -0.14
USHBP1-203ENST00000431146 SLC23A1Q9UHI7 598 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 NCOR2Q9Y618 2525 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 CHD3Q12873 2000 aaKnown RBP14.17□□□□□ -0.14
USHBP1-203ENST00000431146 A8MXE2 369 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 TAS2R31P59538 309 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 SUPT4H1P63272 117 aaKnown RBP14.17□□□□□ -0.14
USHBP1-203ENST00000431146 MSMPQ1L6U9 139 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 MPV17LQ2QL34 196 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 TMEM211Q6ICI0 200 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 Q6ZR03 302 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 SUMF2Q8NBJ7 301 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 TOMM40LQ969M1 308 aa14.17□□□□□ -0.14
USHBP1-203ENST00000431146 ATRXP46100 2492 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 DUS4LO95620 317 aaKnown RBP14.16□□□□□ -0.14
USHBP1-203ENST00000431146 GCH1P30793 250 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 FXYD4P59646 89 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF718Q3SXZ3 478 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 CLEC18BQ6UXF7 455 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 UNQ6126/PRO20091Q6UXV3 157 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF826PQ6ZT77 177 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 ARL6IP6Q8N6S5 226 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 TMEM185AQ8NFB2 350 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 OR5M8Q8NGP6 311 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 MUCL1Q96DR8 90 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 KALRNO60229 2985 aa14.16□□□□□ -0.14
USHBP1-203ENST00000431146 TRAV24A0A0B4J272 114 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 MCRIP1C9JLW8 97 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 HOXD4P09016 255 aaPredicted RBP14.15□□□□□ -0.14
USHBP1-203ENST00000431146 PPP3CBP16298 524 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 SORDQ00796 357 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 MPPED2Q15777 294 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 LRP11Q86VZ4 500 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 PLCE1Q9P212 2302 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 FXYD6-FXYD2A0A087WZ82 144 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 DLL1O00548 723 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 ZNF44P15621 663 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 FCGR2CP31995 323 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 DHODHQ02127 395 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 PRAMEF6Q5VXH4 476 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 VHLLQ6RSH7 139 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 GTF3AQ92664 365 aaKnown RBP14.15□□□□□ -0.14
USHBP1-203ENST00000431146 SCGB3A2Q96PL1 93 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 PDCD10Q9BUL8 212 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 FXYD6Q9H0Q3 95 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 PLK3Q9H4B4 646 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 DUSP13Q9UII6 198 aa14.15□□□□□ -0.14
USHBP1-203ENST00000431146 PLSCR5A0PG75 271 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 NXPH2O95156 264 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 NAPSAO96009 420 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 CXCL2P19875 107 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 NFYAP23511 347 aaPredicted RBP14.14□□□□□ -0.15
USHBP1-203ENST00000431146 LRRC37A5PQ49AS3 106 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 C20orf204Q6ZNR8 217 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 FAM169BQ8N8A8 192 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 ELMOD3Q96FG2 381 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 POM121Q96HA1 1249 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 UFSP2Q9NUQ7 469 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 C14orf166Q9Y224 244 aaKnown RBP14.14□□□□□ -0.15
USHBP1-203ENST00000431146 SIRPB1O00241 398 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 SFT2D2O95562 160 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 PGA5P0DJD9 388 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 KITLGP21583 273 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 CCKARP32238 428 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 PMELP40967 661 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 ERVK11-1P61568 191 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 ANKRD55Q3KP44 614 aa14.14□□□□□ -0.15
USHBP1-203ENST00000431146 RGS7BPQ6MZT1 257 aaPredicted RBP14.14□□□□□ -0.15
USHBP1-203ENST00000431146 DHRS11Q6UWP2 260 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms