RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 IGLC1P0CG04 106 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 ATP1B2P14415 290 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 AADACP22760 399 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 SFTPDP35247 375 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 FOXL2P58012 376 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 BAXQ07812 192 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 MRPL21Q7Z2W9 205 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 TCEAL8Q8IYN2 117 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR4P4Q8NGL7 312 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR1N2Q8NGR9 330 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR6N2Q8NGY6 317 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 SARAFQ96BY9 339 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 UHRF2Q96PU4 802 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 RSG1Q9BU20 258 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 GNG13Q9P2W3 67 aa7.73□□□□□ -1.17
CDC42BPA-206ENST00000429440 C5orf42Q9H799 3197 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 DOCK8Q8NF50 2099 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 NKX2-6A6NCS4 301 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 KBTBD11O94819 623 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 PI3P19957 117 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 ECI1P42126 302 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 GPR6P46095 362 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 YPEL3P61236 119 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 RPL23P62829 140 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 ACSF3Q4G176 576 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 TCTEX1D4Q5JR98 221 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 PARS2Q7L3T8 475 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 TMEM123Q8N131 208 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 DEFB125Q8N687 156 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 OR2Y1Q8NGV0 311 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 PSMF1Q92530 271 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 SPSB1Q96BD6 273 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 FOXN4Q96NZ1 517 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 SIGMAR1Q99720 223 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 PATZ1Q9HBE1 687 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 IER3IP1Q9Y5U9 82 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 TRAV34A0A0B4J273 112 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 A0A1B0GUS0 222 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 A0A1B0GVT2 93 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 DUXBA0A1W2PPF3 345 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 NPIPB15A6NHN6 443 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 TMPRSS11DO60235 418 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 SCGB1D2O95969 90 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 REG1AP05451 166 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 SLC35E2P0CK97 266 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 CSNK2A2P19784 350 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 AZU1P20160 251 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 IL3RAP26951 378 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 CD1BP29016 333 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 CD70P32970 193 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 CEACAM3P40198 252 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 NCBP2P52298 156 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 METAP1P53582 386 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 LINC00310P59036 64 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 CKS1BP61024 79 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 TBPL1P62380 186 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 EWSR1Q01844 656 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 ODF1Q14990 250 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 CDC20BQ86Y33 519 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 ZNF296Q8WUU4 475 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 MBNL1Q9NR56 388 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 FBXL7Q9UJT9 491 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 TP53TG3Q9ULZ0 132 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 RHBDD3Q9Y3P4 386 aa7.72□□□□□ -1.17
CDC42BPA-206ENST00000429440 A0A1B0GTH9 108 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ODAMA1E959 279 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 SERINC4A6NH21 518 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ST8SIA3O43173 380 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF253O75346 499 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZIC2O95409 532 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 HLA-HP01893 362 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 KITLGP21583 273 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 GRPRP30550 384 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 PTGER4P35408 488 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 CDKN2AP42771 156 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 NUMA1Q14980 2115 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 HIST3H3Q16695 136 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 RFLNAQ6ZTI6 216 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 DPY19L4Q7Z388 723 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 MRGPRGQ86SM5 289 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 LYPD6Q86Y78 171 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 SIGLECL1Q8N7X8 197 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 C5orf17Q8NAS9 161 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF480Q8WV37 535 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 DEFB118Q96PH6 123 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ULBP3Q9BZM4 244 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 MOB1AQ9H8S9 216 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 VDAC3Q9Y277 283 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 KLHDC2Q9Y2U9 406 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 HS3ST1O14792 307 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 HCRTR1O43613 425 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 DBHP09172 617 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 DUSP3P51452 185 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 DEFB103AP81534 67 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 Q0VG73 95 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 FOXL1Q12952 345 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms